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BC064078 Pseudogene Detail
Summary
  • Symbol
    BC064078
  • Name
    cDNA sequence BC064078
Location &
Maps
more
  • Sequence Map
    Chr6:128969924-128983610 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 63.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    231 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3040692
 pseudogene Chr6:128969924-128984924 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039836
 pseudogene Chr6:132649441-132664320 (+)
A/J MGP_AJ_G0039838
 pseudogene Chr6:127571940-127586993 (+)
AKR/J MGP_AKRJ_G0039764
 pseudogene Chr6:131034656-131049706 (+)
BALB/cJ MGP_BALBcJ_G0039810
 pseudogene Chr6:127192548-127207591 (+)
C3H/HeJ MGP_C3HHeJ_G0039464
 pseudogene Chr6:131230970-131247110 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040380
 pseudogene Chr6:136124908-136139987 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038574
 pseudogene Chr6:131440550-131455473 (+)
CBA/J MGP_CBAJ_G0039433
 pseudogene Chr6:141466919-141481969 (+)
DBA/2J MGP_DBA2J_G0039633
 pseudogene Chr6:126515121-126530175 (+)
FVB/NJ MGP_FVBNJ_G0039592
 pseudogene Chr6:125410507-125426113 (+)
LP/J MGP_LPJ_G0039671
 pseudogene Chr6:132835502-132850939 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039591
 pseudogene Chr6:145298933-145314176 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040481
 pseudogene Chr6:131106200-131121060 (+)
PWK/PhJ MGP_PWKPhJ_G0038251
 pseudogene Chr6:124800741-124816203 (+)
SPRET/EiJ MGP_SPRETEiJ_G0037996
 pseudogene Chr6:129127358-129143343 (+)
WSB/EiJ MGP_WSBEiJ_G0038807
 pseudogene Chr6:131511355-131527579 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 408064 NCBI Gene Model | MGI Sequence Detail 13687 C57BL/6J ±  kb
transcript NR_015455 RefSeq | MGI Sequence Detail 917 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 2
References
more
  • Summaries
    All 12
    Phenotypes 2
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory