BC055308 Gene Detail

Summary

• Symbol
  BC055308
• Name
  cDNA sequence BC055308

• Feature Type
  unclassified gene
• IDs
  MGI:3039612
  NCBI Gene: 407818
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:95256406-95258943 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  187 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3039612	unclassified gene	Chr1:95256406-95258943 (+)
129S1/SvImJ	ENSMUSG00200000249	unclassified gene	Chr1:92397903-92400440 (+)
A/J	ENSMUSG00195000346	unclassified gene	Chr1:91965673-91968211 (+)
AKR/J	ENSMUSG00220000222	unclassified gene	Chr1:92192544-92195075 (+)
BALB/cJ	ENSMUSG00180005840	unclassified gene	Chr1:92273458-92275995 (+)
C3H/HeJ	ENSMUSG00175005620	unclassified gene	Chr1:92173636-92176174 (+)
C57BL/6NJ	ENSMUSG00215000345	unclassified gene	Chr1:92161825-92164362 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000366	unclassified gene	Chr1:88093448-88095946 (+)
CAST/EiJ	ENSTCUG00005000160	unclassified gene	Chr1:91907871-91910399 (+)
CBA/J	ENSMUSG00210000116	unclassified gene	Chr1:92023650-92026187 (+)
DBA/2J	ENSMUSG00185014295	unclassified gene	Chr1:96460266-96462803 (+)
FVB/NJ	ENSMUSG00205000855	unclassified gene	Chr1:91392453-91394990 (+)
JF1/MsJ	ENSUMUG00000024364	unclassified gene	Chr1:95243452-95245962 (+)
LP/J	ENSMUSG00230024058	unclassified gene	Chr1:95723939-95726476 (+)
NOD/ShiLtJ	ENSMUSG00190000409	unclassified gene	Chr1:92037676-92040213 (+)
NZO/HlLtJ	ENSMUSG00225003797	unclassified gene	Chr1:99634727-99637265 (+)
PWK/PhJ	ENSLUMG00010006597	unclassified gene	Chr1:91626755-91629284 (+)
SPRET/EiJ	ENSMSPG00010000801	unclassified gene	Chr1:93668592-93671101 (+)
WSB/EiJ	ENSIUOG00005000294	unclassified gene	Chr1:91709309-91711846 (+)

Homology

• Gene Tree
  BC055308
  

Expression

• Assay Results
  597
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23

• Ensembl
  ENSMUSG00000103973 (Evidence)
• NCBI Gene
  407818

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103973	Ensembl Gene Model | MGI Sequence Detail	2538	C57BL/6J
transcript	AK141640	GenBank | ENA | DDBJ | MGI Sequence Detail	2540	C57BL/6J

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 9
• Earliest
  J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563