Gm1866 Pseudogene Detail

Summary

• Symbol
  Gm1866
• Name
  predicted gene 1866
• Synonyms
  LOC331507

• Feature Type
  pseudogene
• IDs
  MGI:3037724
  NCBI Gene: 331507
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  ChrX:113501745-113502221 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 49.47 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  72 from dbSNP Build 142
• Strain Annotations
  37

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3037724	pseudogene	ChrX:113500829-113502246 (-)
129S1/SvImJ	ENSMUSG00200024617	pseudogene	ChrX:95316446-95316922 (-)
129S1/SvImJ	ENSMUSG00200010841	pseudogene	Chr10:23962955-23963427 (+)
A/J	ENSMUSG00195047348	pseudogene	Chr13:58087380-58087856 (-)
A/J	ENSMUSG00195015791	pseudogene	Chr10:24265349-24265825 (+)
A/J	ENSMUSG00195026742	pseudogene	ChrX:98990378-98990854 (-)
AKR/J	ENSMUSG00220013694	pseudogene	ChrX:93300244-93300720 (-)
AKR/J	ENSMUSG00220045898	pseudogene	Chr13:57607940-57608414 (-)
AKR/J	ENSMUSG00220011968	pseudogene	Chr10:23946839-23947311 (+)
BALB/cJ	ENSMUSG00180020159	pseudogene	Chr10:24394123-24394599 (+)
BALB/cJ	ENSMUSG00180018987	pseudogene	Chr13:58296564-58297040 (-)
BALB/cJ	ENSMUSG00180027741	pseudogene	ChrX:95649544-95650020 (-)
C3H/HeJ	ENSMUSG00175027203	pseudogene	Chr10:24062279-24062755 (+)
C3H/HeJ	ENSMUSG00175029195	pseudogene	ChrX:99255198-99255674 (-)
C3H/HeJ	ENSMUSG00175047060	pseudogene	Chr13:58082177-58082655 (-)
C57BL/6NJ	ENSMUSG00215015427	pseudogene	ChrX:95944185-95944661 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005021245	pseudogene	ChrX:96655415-96655891 (-)
CBA/J	ENSMUSG00210022392	pseudogene	ChrX:96123402-96123878 (-)
CBA/J	ENSMUSG00210044992	pseudogene	Chr13:58287016-58287494 (-)
DBA/2J	ENSMUSG00185030341	pseudogene	ChrX:108658634-108659110 (-)
DBA/2J	ENSMUSG00185018948	pseudogene	Chr13:59135636-59136110 (-)
FVB/NJ	ENSMUSG00205011234	pseudogene	Chr10:24203491-24203963 (+)
FVB/NJ	ENSMUSG00205021170	pseudogene	ChrX:95173931-95174407 (-)
FVB/NJ	ENSMUSG00205047211	pseudogene	Chr13:57860629-57861103 (-)
JF1/MsJ	ENSUMUG00000043269	pseudogene	Chr13:58486086-58486562 (-)
JF1/MsJ	ENSUMUG00000018487	pseudogene	ChrX:129217282-129217758 (-)
LP/J	ENSMUSG00230013044	pseudogene	Chr10:25997368-25997840 (+)
LP/J	ENSMUSG00230005674	pseudogene	ChrX:115286964-115287440 (-)
LP/J	ENSMUSG00230036529	pseudogene	Chr13:68500395-68500869 (-)
NOD/ShiLtJ	ENSMUSG00190016387	pseudogene	Chr10:24352763-24353235 (+)
NOD/ShiLtJ	ENSMUSG00190013715	pseudogene	ChrX:95392802-95393278 (-)
NZO/HlLtJ	ENSMUSG00225040879	pseudogene	ChrX:120459656-120460132 (-)
NZO/HlLtJ	ENSMUSG00225048596	pseudogene	Chr13:62186085-62186559 (-)
NZO/HlLtJ	ENSMUSG00225031670	pseudogene	Chr10:30256233-30256705 (+)
PWK/PhJ	ENSLUMG00010026704	pseudogene	ChrX:94502724-94503200 (-)
PWK/PhJ	ENSLUMG00010025605	pseudogene	Chr13:57410638-57411114 (-)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005015089	pseudogene	ChrX:95758633-95759109 (-)

Homology

• Gene Tree
  Gm1866
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  42
• RefSeq
  2

• Ensembl
  ENSMUSG00000082070 (Evidence)
• NCBI Gene
  331507

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082070	Ensembl Gene Model | MGI Sequence Detail	477	C57BL/6J
transcript	ENSMUST00000120701	Ensembl | MGI Sequence Detail	477	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:50526 Magherini F, et al., Cloning of murine low molecular weight phosphotyrosine protein phosphatase cDNA: identification of a new isoform. FEBS Lett. 1998 Oct 23;437(3):263-6