A430110L20Rik Gene Detail

Summary

• Symbol
  A430110L20Rik
• Name
  RIKEN cDNA A430110L20 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3036249
  NCBI Gene: 329307
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr1:181053551-181056063 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 84.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  160 from dbSNP Build 142
• Strain Annotations
  30

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3036249	lncRNA gene	Chr1:181053551-181056063 (+)
129S1/SvImJ	ENSMUSG00200023774	lncRNA gene	Chr1:178807461-178809973 (+)
A/J	ENSMUSG00195043325	lncRNA gene	Chr1:178424711-178427225 (+)
A/J	ENSMUSG00195038505	protein coding gene	Chr1:178412734-178426930 (+)
AKR/J	ENSMUSG00220021975	lncRNA gene	Chr1:177659023-177661537 (+)
AKR/J	ENSMUSG00220019235	protein coding gene	Chr1:177644625-177661242 (+)
BALB/cJ	ENSMUSG00180040148	lncRNA gene	Chr1:178458679-178461191 (+)
BALB/cJ	ENSMUSG00180033324	protein coding gene	Chr1:178444310-178460896 (+)
C3H/HeJ	ENSMUSG00175041704	lncRNA gene	Chr1:178634469-178636981 (+)
C3H/HeJ	ENSMUSG00175036512	protein coding gene	Chr1:178620102-178636686 (+)
C57BL/6NJ	ENSMUSG00215012950	protein coding gene	Chr1:177844797-177861383 (+)
C57BL/6NJ	ENSMUSG00215031421	lncRNA gene	Chr1:177859166-177861678 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004573	lincRNA gene	Chr1:171110954-171113428 (+)
CAST/EiJ	ENSTCUG00005043870	lncRNA gene	Chr1:176386046-176388550 (+)
CBA/J	ENSMUSG00210018520	protein coding gene	Chr1:178295603-178309809 (+)
CBA/J	ENSMUSG00210019065	lncRNA gene	Chr1:178307590-178310104 (+)
DBA/2J	ENSMUSG00185035037	protein coding gene	Chr1:182915002-182929207 (+)
DBA/2J	ENSMUSG00185037120	lncRNA gene	Chr1:182926988-182929502 (+)
FVB/NJ	ENSMUSG00205029012	protein coding gene	Chr1:177340898-177357493 (+)
FVB/NJ	ENSMUSG00205040003	lncRNA gene	Chr1:177355276-177357788 (+)
JF1/MsJ	ENSUMUG00000005873	lncRNA gene	Chr1:181904855-181907359 (+)
LP/J	ENSMUSG00230033306	lncRNA gene	Chr1:182472927-182475439 (+)
LP/J	ENSMUSG00230027636	protein coding gene	Chr1:182458560-182475144 (+)
NOD/ShiLtJ	ENSMUSG00190028378	protein coding gene	Chr1:178305940-178322522 (+)
NOD/ShiLtJ	ENSMUSG00190034993	lncRNA gene	Chr1:178320305-178322817 (+)
NZO/HlLtJ	ENSMUSG00225009963	protein coding gene	Chr1:186211765-186228380 (+)
NZO/HlLtJ	ENSMUSG00225011280	lncRNA gene	Chr1:186226161-186228675 (+)
PWK/PhJ	ENSLUMG00010016835	lncRNA gene	Chr1:177167112-177169626 (+)
SPRET/EiJ	ENSMSPG00010035607	lncRNA gene	Chr1:180645859-180648356 (+)
WSB/EiJ	ENSIUOG00005011645	lncRNA gene	Chr1:177533589-177536102 (+)

Homology

• Gene Tree
  A430110L20Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  2
• Genomic Mutations
  2 involving A430110L20Rik
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  8 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  35
• UniProt
  1

• Ensembl
  ENSMUSG00000054135 (Evidence)
• NCBI Gene
  329307

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000054135	Ensembl Gene Model | MGI Sequence Detail	2513	C57BL/6J
transcript	ENSMUST00000181680	Ensembl | MGI Sequence Detail	2513	Not Applicable
polypeptide	Q8C9T2	UniProt | EBI | MGI Sequence Detail	175	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 11

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;