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AA414768 Pseudogene Detail
Summary
  • Symbol
    AA414768
  • Name
    expressed sequence AA414768
  • Synonyms
    OTTMUSG00000017000
Location &
Maps
more
  • Sequence Map
    ChrX:12803112-12804780 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 7.80 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    131 from dbSNP Build 142
  • Strain Annotations
    35
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3035137
 pseudogene ChrX:12803111-12804782 (+)
129S1/SvImJ ENSMUSG00200034519
 pseudogene ChrX:7546920-7548176 (+)
129S1/SvImJ ENSMUSG00200031257
 protein coding gene ChrX:7546812-7548590 (+)
A/J ENSMUSG00195042007
 pseudogene ChrX:7519229-7520485 (+)
A/J ENSMUSG00195038993
 protein coding gene ChrX:7519121-7520971 (+)
AKR/J ENSMUSG00220035395
 pseudogene ChrX:7055974-7057230 (+)
AKR/J ENSMUSG00220033278
 protein coding gene ChrX:7055866-7057716 (+)
BALB/cJ ENSMUSG00180030440
 pseudogene ChrX:7518654-7519910 (+)
BALB/cJ ENSMUSG00180028335
 protein coding gene ChrX:7518546-7520396 (+)
C3H/HeJ ENSMUSG00175035512
 pseudogene ChrX:7543825-7545081 (+)
C3H/HeJ ENSMUSG00175030995
 protein coding gene ChrX:7543717-7545567 (+)
C57BL/6NJ ENSMUSG00215040547
 protein coding gene ChrX:8181729-8183579 (+)
C57BL/6NJ ENSMUSG00215041103
 pseudogene ChrX:8181837-8183093 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012528
 pseudogene ChrX:6793612-6794841 (+)
CAST/EiJ ENSTCUG00005035276
 pseudogene ChrX:7514832-7516073 (+)
CBA/J ENSMUSG00210038199
 protein coding gene ChrX:7593003-7594853 (+)
CBA/J ENSMUSG00210039216
 pseudogene ChrX:7593111-7594367 (+)
DBA/2J ENSMUSG00185036441
 pseudogene ChrX:14182344-14183600 (+)
DBA/2J ENSMUSG00185035770
 protein coding gene ChrX:14182236-14184086 (+)
FVB/NJ ENSMUSG00205030996
 protein coding gene ChrX:7254869-7256719 (+)
FVB/NJ ENSMUSG00205036760
 pseudogene ChrX:7254977-7256233 (+)
JF1/MsJ ENSUMUG00000042824
 pseudogene ChrX:28040281-28041525 (+)
JF1/MsJ ENSUMUG00000026756
 protein coding gene ChrX:28040249-28042011 (+)
LP/J ENSMUSG00230032241
 pseudogene ChrX:18765473-18766729 (+)
LP/J ENSMUSG00230031877
 protein coding gene ChrX:18765365-18767215 (+)
NOD/ShiLtJ ENSMUSG00190032239
 protein coding gene ChrX:7542187-7544037 (+)
NOD/ShiLtJ ENSMUSG00190043858
 pseudogene ChrX:7542295-7543551 (+)
NZO/HlLtJ ENSMUSG00225033727
 pseudogene ChrX:23972802-23974058 (+)
NZO/HlLtJ ENSMUSG00225033244
 protein coding gene ChrX:23972694-23974544 (+)
PWK/PhJ ENSLUMG00010029617
 protein coding gene ChrX:7428311-7430149 (+)
PWK/PhJ ENSLUMG00010036294
 pseudogene ChrX:7428419-7429663 (+)
SPRET/EiJ ENSMSPG00010023019
 protein coding gene ChrX:8396143-8397975 (+)
SPRET/EiJ ENSMSPG00010024821
 pseudogene ChrX:8396251-8397489 (+)
WSB/EiJ ENSIUOG00005016976
 pseudogene ChrX:4227223-4228482 (+)
WSB/EiJ ENSIUOG00005016120
 protein coding gene ChrX:4227115-4228968 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
  • All Sequences
    48
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 245350 NCBI Gene Model | MGI Sequence Detail 1669 C57BL/6J ±  kb
transcript NM_001272033 RefSeq | MGI Sequence Detail 1680 C57BL/6  
polypeptide NP_001258962 RefSeq | MGI Sequence Detail 387 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • EC
    2.3.2.23
  • InterPro Domains
    IPR006575 RWD domain
    IPR050113 Ubiquitin-conjugating enzyme E2-like
    IPR016135 Ubiquitin-conjugating enzyme/RWD-like
    IPR000608 Ubiquitin-conjugating (UBC), catalytic core domain
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2
Other
Accession IDs
less
MGI:3705633
References
more
  • Summaries
    All 17
    Gene Ontology 4
    Phenotypes 2
  • Earliest
    J:66992 Douglas KR, et al., Partial transcriptome of the developing pituitary gland. Genomics. 2000 Dec 15;70(3):335-46
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory