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Or4a80 Gene Detail
Summary
  • Symbol
    Or4a80
  • Name
    olfactory receptor family 4 subfamily A member 80
  • Synonyms
    GA_x6K02T2Q125-51193814-51192857, MOR231-18, MOR231-19P, MOR231-19P, Olfr1253, Olfr1253-ps1, Olfr1559-ps1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3031393
    NCBI Gene: 258370
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:89582214-89583170 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 50.12 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    10
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3031393
protein coding gene Chr2:89579811-89587434 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026109
protein coding gene Chr2:90949606-90950562 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0026528
protein coding gene Chr2:94091786-94093134 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023920
protein coding gene Chr2:83756252-83757208 (-)
CAST/EiJ MGP_CASTEiJ_G0025295
protein coding gene Chr2:90577543-90579302 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0026049
protein coding gene Chr2:91113404-91114528 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0026585
protein coding gene Chr2:89819231-89820187 (-)
PWK/PhJ MGP_PWKPhJ_G0025029
protein coding gene Chr2:86839785-86841057 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024834
protein coding gene Chr2:89573654-89574540 (-)
WSB/EiJ MGP_WSBEiJ_G0025363
protein coding gene Chr2:90579180-90580136 (-)



Homology
more
  • Human Ortholog
    OR4A16, olfactory receptor family 4 subfamily A member 16
  • Vertebrate Orthologs
    29
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR4A16, olfactory receptor family 4 subfamily A member 16
  • Synonyms
    OR11-117, OR4A16Q
  • Links
    NCBI Gene ID: 81327
    neXtProt AC: NX_Q8NH70
    UniProt: Q8NH70

  • Chr Location
    11q11; chr11:55343201-55344187 (+)  GRCh38.p7

  • Human Ortholog
    OR4A5, olfactory receptor family 4 subfamily A member 5
  • Synonyms
    OR11-111
  • Links
    NCBI Gene ID: 81318
    neXtProt AC: NX_Q8NH83
    UniProt: Q8NH83

  • Chr Location
    11q11; chr11:54706832-54707902 (+)  GRCh38.p7

  • Human Ortholog
    OR4A8, olfactory receptor family 4 subfamily A member 8 (gene/pseudogene)
  • Synonyms
    OR4A8P
  • Links
    NCBI Gene ID: 81315
    UniProt: P0C604

  • Chr Location
    11q11; chr11:54682876-54683820 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 258370 NCBI Gene Model | MGI Sequence Detail 957 C57BL/6J ±  kb
transcript NM_146373 RefSeq | MGI Sequence Detail 957 C57BL/6  
polypeptide NP_666485 RefSeq | MGI Sequence Detail 318 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Other
Accession IDs
less
MGI:3031087
References
more
  • Summaries
    All 16
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/21/2023
MGI 6.22
The Jackson Laboratory