Olfr1421-ps1 Pseudogene Detail

Summary

• Symbol
  Olfr1421-ps1
• Name
  olfactory receptor 1421, pseudogene 1
• Synonyms
  GA_x6K02T2RE5P-2376853-2377277

• Feature Type
  pseudogene
• IDs
  MGI:3031255
  NCBI Gene: 404514
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr19:11997539-11997746 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 8.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  148 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3031255	pseudogene	Chr19:11997539-11997767 (+)
129S1/SvImJ	ENSMUSG00200053473	pseudogene	Chr19:8688068-8688275 (+)
A/J	ENSMUSG00195053943	pseudogene	Chr19:8890612-8890819 (+)
AKR/J	ENSMUSG00220051193	pseudogene	Chr19:8796426-8796633 (+)
BALB/cJ	ENSMUSG00180051922	pseudogene	Chr19:9255188-9255395 (+)
C3H/HeJ	ENSMUSG00175015795	pseudogene	Chr19:8528260-8528467 (+)
C57BL/6NJ	ENSMUSG00215048394	pseudogene	Chr19:8598614-8598821 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005044657	pseudogene	Chr19:8391983-8392190 (+)
CBA/J	ENSMUSG00210050714	pseudogene	Chr19:8726781-8726988 (+)
DBA/2J	ENSMUSG00185053894	pseudogene	Chr19:9136772-9136979 (+)
FVB/NJ	ENSMUSG00205052998	pseudogene	Chr19:8595143-8595350 (+)
JF1/MsJ	ENSUMUG00000056345	pseudogene	Chr19:9249399-9249652 (+)
LP/J	ENSMUSG00230021177	pseudogene	Chr19:10055831-10056038 (+)
NOD/ShiLtJ	ENSMUSG00190053345	pseudogene	Chr19:8353225-8353432 (+)
NZO/HlLtJ	ENSMUSG00225047243	pseudogene	Chr19:13764775-13764982 (+)
PWK/PhJ	ENSLUMG00010008416	pseudogene	Chr19:8660812-8661065 (+)
SPRET/EiJ	ENSMSPG00010051365	pseudogene	Chr19:8478250-8478457 (+)
WSB/EiJ	ENSIUOG00005051009	pseudogene	Chr19:8255460-8255667 (+)

Homology

• Gene Tree
  Olfr1421-ps1
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000109030 (Evidence)
• NCBI Gene
  404514

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000109030	Ensembl Gene Model | MGI Sequence Detail	208	C57BL/6J
transcript	ENSMUST00000208900	Ensembl | MGI Sequence Detail	208	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:88213 Young JM, et al., Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Genome Biol. 2003;4(11):R71