Or12e16-ps1 Pseudogene Detail

Summary

• Symbol
  Or12e16-ps1
• Name
  olfactory receptor family 12 subfamily E member 16, pseudogene 1
• Synonyms
  GA_x6K02T2Q125-49341030-49341940, MOR264-14P, Olfr1149-ps1

• Feature Type
  pseudogene
• IDs
  MGI:3030983
  NCBI Gene: 258099
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:87670086-87670776 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 49.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030983	pseudogene	Chr2:87670074-87670776 (+)
129S1/SvImJ	ENSMUSG00200053939	pseudogene	Chr2:84720646-84721336 (+)
A/J	ENSMUSG00195053758	pseudogene	Chr2:84810425-84811115 (+)
AKR/J	ENSMUSG00220052758	pseudogene	Chr2:84715865-84716555 (+)
BALB/cJ	ENSMUSG00180054875	pseudogene	Chr2:84738162-84738852 (+)
C3H/HeJ	ENSMUSG00175054304	pseudogene	Chr2:84905096-84905786 (+)
C57BL/6NJ	ENSMUSG00215053799	pseudogene	Chr2:84775531-84776221 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037262	pseudogene	Chr2:82065858-82066305 (+)
CAST/EiJ	ENSTCUG00005052774	pseudogene	Chr2:84208177-84208867 (+)
CBA/J	ENSMUSG00210043413	pseudogene	Chr2:84932922-84933612 (+)
DBA/2J	ENSMUSG00185057280	pseudogene	Chr2:84734294-84734984 (+)
FVB/NJ	ENSMUSG00205052577	pseudogene	Chr2:84076844-84077534 (+)
JF1/MsJ	ENSUMUG00000033556	pseudogene	Chr2:84602427-84603119 (+)
LP/J	ENSMUSG00230046498	pseudogene	Chr2:86485178-86485868 (+)
NOD/ShiLtJ	ENSMUSG00190051004	pseudogene	Chr2:84799897-84800587 (+)
NZO/HlLtJ	ENSMUSG00225053485	pseudogene	Chr2:94394891-94395581 (+)
PWK/PhJ	ENSLUMG00010052562	pseudogene	Chr2:84681714-84682406 (+)
SPRET/EiJ	ENSMSPG00010052224	pseudogene	Chr2:86587505-86588198 (+)
WSB/EiJ	ENSIUOG00005053459	pseudogene	Chr2:84630533-84631225 (+)

Homology

• Gene Tree
  Or12e16-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  3 involving Or12e16-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000082982 (Evidence)
• NCBI Gene
  258099

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082982	Ensembl Gene Model | MGI Sequence Detail	691	C57BL/6J
transcript	ENSMUST00000118232	Ensembl | MGI Sequence Detail	691	Not Applicable

Other
Accession IDs

MGI:7276419

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42