Or5g28-ps1 Pseudogene Detail

Summary

• Symbol
  Or5g28-ps1
• Name
  olfactory receptor family 5 subfamily G member 28, pseudogene 1
• Synonyms
  GA_x6K02T2Q125-47063926-47064864, MOR175-8P, Olfr997-ps1

• Feature Type
  pseudogene
• IDs
  MGI:3030831
  NCBI Gene: 257998
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr2:85415448-85416383 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 49.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  128 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030831	pseudogene	Chr2:85415448-85416386 (+)
129S1/SvImJ	ENSMUSG00200053925	pseudogene	Chr2:82436441-82437379 (+)
A/J	ENSMUSG00195053590	pseudogene	Chr2:82530784-82531721 (+)
AKR/J	ENSMUSG00220052828	pseudogene	Chr2:82409526-82410463 (+)
BALB/cJ	ENSMUSG00180054910	pseudogene	Chr2:82458572-82459509 (+)
C3H/HeJ	ENSMUSG00175054275	pseudogene	Chr2:82596607-82597544 (+)
C57BL/6NJ	ENSMUSG00215053946	pseudogene	Chr2:82521573-82522511 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037243	pseudogene	Chr2:79762167-79763085 (+)
CAST/EiJ	ENSTCUG00005052914	pseudogene	Chr2:81954917-81955855 (+)
CBA/J	ENSMUSG00210041333	pseudogene	Chr2:82624537-82625474 (+)
DBA/2J	ENSMUSG00185057251	pseudogene	Chr2:82454788-82455725 (+)
FVB/NJ	ENSMUSG00205052180	pseudogene	Chr2:81841102-81842040 (+)
JF1/MsJ	ENSUMUG00000036280	pseudogene	Chr2:82390142-82391087 (+)
LP/J	ENSMUSG00230045423	pseudogene	Chr2:84205827-84206764 (+)
NOD/ShiLtJ	ENSMUSG00190051758	pseudogene	Chr2:82520496-82521433 (+)
NZO/HlLtJ	ENSMUSG00225053259	pseudogene	Chr2:92115611-92116548 (+)
PWK/PhJ	ENSLUMG00010052591	pseudogene	Chr2:82407501-82408446 (+)
SPRET/EiJ	ENSMSPG00010052106	pseudogene	Chr2:84341141-84342083 (+)
WSB/EiJ	ENSIUOG00005053375	pseudogene	Chr2:82462116-82463061 (+)

Homology

• Gene Tree
  Or5g28-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  3 involving Or5g28-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000081047 (Evidence)
• NCBI Gene
  257998

Representative Sequences			Length	Strain/Species
genomic	257998	NCBI Gene Model | MGI Sequence Detail	936	C57BL/6J

Other
Accession IDs

MGI:7277645

References

• Summaries
  All 13

  Phenotypes 5
• Earliest
  J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42