Or51l1 Pseudogene Detail

Summary

• Symbol
  Or51l1
• Name
  olfactory receptor family 51 subfamily L member 1
• Synonyms
  GA_x6K02T2PBJ9-5847983-5848930, MOR7-3_p, Olfr587-ps1, Or51l1-ps1

• Feature Type
  polymorphic pseudogene
  BioType Conflict
  
• IDs
  MGI:3030421
  NCBI Gene: 404407
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:102783583-102784530 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 54.85 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  120 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030421	polymorphic pseudogene	Chr7:102783583-102784530 (+)
129S1/SvImJ	ENSMUSG00200048763	protein coding gene	Chr7:89631203-89632150 (+)
A/J	ENSMUSG00195054644	protein coding gene	Chr7:94130470-94131417 (+)
AKR/J	ENSMUSG00220049489	protein coding gene	Chr7:87545545-87546492 (+)
BALB/cJ	ENSMUSG00180026749	protein coding gene	Chr7:90813784-90814731 (+)
C3H/HeJ	ENSMUSG00175045320	protein coding gene	Chr7:91454986-91455933 (+)
C57BL/6NJ	ENSMUSG00215025569	protein coding gene	Chr7:90630896-90631843 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037464	pseudogene	Chr7:105769604-105770551 (+)
CAST/EiJ	ENSTCUG00005051554	protein coding gene	Chr7:93999768-94000715 (+)
CBA/J	ENSMUSG00210045073	protein coding gene	Chr7:91317419-91318366 (+)
DBA/2J	ENSMUSG00185055598	protein coding gene	Chr7:95633182-95634129 (+)
FVB/NJ	ENSMUSG00205043787	protein coding gene	Chr7:91302331-91303278 (+)
JF1/MsJ	ENSUMUG00000049253	protein coding gene	Chr7:100517872-100518819 (+)
LP/J	ENSMUSG00230048224	protein coding gene	Chr7:101735495-101736442 (+)
NOD/ShiLtJ	ENSMUSG00190043193	protein coding gene	Chr7:91552336-91553283 (+)
NZO/HlLtJ	ENSMUSG00225048250	protein coding gene	Chr7:99968671-99969618 (+)
PWK/PhJ	ENSLUMG00010043985	protein coding gene	Chr7:89764214-89765161 (+)
SPRET/EiJ	ENSMSPG00010029075	protein coding gene	Chr7:91030690-91031637 (+)
WSB/EiJ	ENSIUOG00005048420	protein coding gene	Chr7:91883760-91884707 (+)

Homology

• Gene Tree
  Or51l1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Endonuclease-mediated
  1
• Radiation induced
  1
• Genomic Mutations
  3 involving Or51l1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  3

• Ensembl
  ENSMUSG00000080891 (Evidence)
• NCBI Gene
  404407

Representative Sequences			Length	Strain/Species
genomic	404407	NCBI Gene Model | MGI Sequence Detail	948	C57BL/6J
transcript	NR_190761	RefSeq | MGI Sequence Detail	948	C57BL/6
polypeptide	NP_001416616	RefSeq | MGI Sequence Detail	315	Not Specified

Other
Accession IDs

MGI:7277223, MGI:7785279

References

• Summaries
  All 19

  Phenotypes 10
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42