Or51f23c Pseudogene Detail

Summary

• Symbol
  Or51f23c
• Name
  olfactory receptor family 51 subfamily F member 23C
• Synonyms
  GA_x6K02T2PBJ9-5498153-5499103, MOR14-5, Olfr562-ps1, Or51f23c-ps1

• Feature Type
  polymorphic pseudogene
  BioType Conflict
  
• IDs
  MGI:3030396
  NCBI Gene: 259090
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:102430685-102431635 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 54.84 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  142 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030396	polymorphic pseudogene	Chr7:102430685-102431635 (+)
129S1/SvImJ	ENSMUSG00200044108	protein coding gene	Chr7:89270939-89271889 (+)
A/J	ENSMUSG00195053402	protein coding gene	Chr7:93776966-93777916 (+)
AKR/J	ENSMUSG00220048819	protein coding gene	Chr7:87193440-87194390 (+)
BALB/cJ	ENSMUSG00180028154	protein coding gene	Chr7:90449639-90450589 (+)
C3H/HeJ	ENSMUSG00175050654	protein coding gene	Chr7:91103813-91104763 (+)
C57BL/6NJ	ENSMUSG00215023336	protein coding gene	Chr7:90277933-90278883 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005050571	protein coding gene	Chr7:93683195-93684145 (+)
CBA/J	ENSMUSG00210045404	protein coding gene	Chr7:90957170-90958120 (+)
DBA/2J	ENSMUSG00185056471	protein coding gene	Chr7:95279699-95280649 (+)
FVB/NJ	ENSMUSG00205041797	protein coding gene	Chr7:90947817-90948767 (+)
JF1/MsJ	ENSUMUG00000040262	protein coding gene	Chr7:100199594-100200544 (+)
LP/J	ENSMUSG00230040558	protein coding gene	Chr7:101382044-101382994 (+)
NOD/ShiLtJ	ENSMUSG00190029452	protein coding gene	Chr7:91258498-91259448 (+)
NZO/HlLtJ	ENSMUSG00225047926	protein coding gene	Chr7:99616716-99617666 (+)
PWK/PhJ	ENSLUMG00010039789	protein coding gene	Chr7:89452498-89453448 (+)
SPRET/EiJ	ENSMSPG00010012132	protein coding gene	Chr7:90715700-90716650 (+)
WSB/EiJ	ENSIUOG00005043122	protein coding gene	Chr7:91544428-91545378 (+)

Homology

• Gene Tree
  Or51f23c
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  10 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Or51f23c
• Find Mice (IMSR)
  9 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  3

• Ensembl
  ENSMUSG00000110122 (Evidence)
• NCBI Gene
  259090

Representative Sequences			Length	Strain/Species
genomic	259090	NCBI Gene Model | MGI Sequence Detail	951	C57BL/6J
transcript	NR_190795	RefSeq | MGI Sequence Detail	951	C57BL/6
polypeptide	NP_001416734	RefSeq | MGI Sequence Detail	316	Not Specified

Other
Accession IDs

MGI:7277196, MGI:7785278

References

• Summaries
  All 18

  Phenotypes 10
• Earliest
  J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42