Or13o1-ps1 Pseudogene Detail

Summary

• Symbol
  Or13o1-ps1
• Name
  olfactory receptor family 13 subfamily O member 1, pseudogene 1
• Synonyms
  GA_x6K02T2PBJ9-42491534-42492410, MOR252-5_p, Olfr528-ps1

• Feature Type
  pseudogene
• IDs
  MGI:3030362
  NCBI Gene: 404400
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:139921403-139922108 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 85.41 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  157 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030362	pseudogene	Chr7:139921390-139922117 (+)
129S1/SvImJ	ENSMUSG00200047224	pseudogene	Chr7:126486135-126486862 (+)
A/J	ENSMUSG00195042548	pseudogene	Chr7:130968527-130969254 (+)
AKR/J	ENSMUSG00220037679	pseudogene	Chr7:124433451-124434178 (+)
BALB/cJ	ENSMUSG00180043333	pseudogene	Chr7:127660773-127661500 (+)
C3H/HeJ	ENSMUSG00175045580	pseudogene	Chr7:128389035-128389762 (+)
C57BL/6NJ	ENSMUSG00215048822	pseudogene	Chr7:127655534-127656261 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005051121	pseudogene	Chr7:130937708-130938435 (+)
CBA/J	ENSMUSG00210030912	pseudogene	Chr7:128114753-128115480 (+)
DBA/2J	ENSMUSG00185018093	pseudogene	Chr7:132425584-132426311 (+)
FVB/NJ	ENSMUSG00205045502	pseudogene	Chr7:128112356-128113083 (+)
JF1/MsJ	ENSUMUG00000047709	pseudogene	Chr7:137512784-137513511 (+)
LP/J	ENSMUSG00230043471	pseudogene	Chr7:138589123-138589850 (+)
NOD/ShiLtJ	ENSMUSG00190031573	pseudogene	Chr7:128254546-128255273 (+)
NZO/HlLtJ	ENSMUSG00225052311	pseudogene	Chr7:136798353-136799080 (+)
PWK/PhJ	ENSLUMG00010048899	pseudogene	Chr7:126646526-126647253 (+)
SPRET/EiJ	ENSMSPG00010044265	pseudogene	Chr7:128030288-128031014 (+)
WSB/EiJ	ENSIUOG00005036407	pseudogene	Chr7:128956305-128957032 (+)

Homology

• Gene Tree
  Or13o1-ps1
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Or13o1-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000110059 (Evidence)
• NCBI Gene
  404400

Representative Sequences			Length	Strain/Species
genomic	404400	NCBI Gene Model | MGI Sequence Detail	706	C57BL/6J

Other
Accession IDs

MGI:7277158

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:65007 Cattanach BM, et al., Two imprinted gene mutations: three phenotypes. Hum Mol Genet. 2000 Sep 22;9(15):2263-73
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42