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Or1d2 Gene Detail
Summary
  • Symbol
    Or1d2
  • Name
    olfactory receptor family 1 subfamily D member 2
  • Synonyms
    GA_x6K02T2P1NL-4500587-4501525, MOR127-5P, Olfr412
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030246
    NCBI Gene: 258153
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr11:74255497-74256435 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 45.76 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    13 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030246
 protein coding gene Chr11:74252895-74257044 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018693
 protein coding gene Chr11:75047080-75048074 (+)
A/J MGP_AJ_G0018659
 protein coding gene Chr11:72273729-72274723 (+)
AKR/J MGP_AKRJ_G0018629
 protein coding gene Chr11:74447622-74448616 (+)
BALB/cJ MGP_BALBcJ_G0018633
 protein coding gene Chr11:72631221-72634010 (+)
C3H/HeJ MGP_C3HHeJ_G0018446
 protein coding gene Chr11:74459282-74460276 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019084
 protein coding gene Chr11:77411948-77412942 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016719
 protein coding gene Chr11:69298262-69299256 (+)
CAST/EiJ MGP_CASTEiJ_G0018000
 protein coding gene Chr11:74831398-74832392 (+)
CBA/J MGP_CBAJ_G0018416
 protein coding gene Chr11:80796849-80797843 (+)
DBA/2J MGP_DBA2J_G0018525
 protein coding gene Chr11:71872762-71873756 (+)
FVB/NJ MGP_FVBNJ_G0018515
 protein coding gene Chr11:71442846-71443840 (+)
LP/J MGP_LPJ_G0018596
 protein coding gene Chr11:75614725-75615719 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018541
 protein coding gene Chr11:81398552-81399546 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019124
 protein coding gene Chr11:74657161-74658155 (+)
PWK/PhJ MGP_PWKPhJ_G0017771
 protein coding gene Chr11:72562201-72563195 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017562
 protein coding gene Chr11:74214055-74215049 (+)
WSB/EiJ MGP_WSBEiJ_G0018053
 protein coding gene Chr11:74461983-74462977 (+)



Homology
more
  • Human Ortholog
    OR1D2, olfactory receptor family 1 subfamily D member 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR1D2, olfactory receptor family 1 subfamily D member 2
  • Synonyms
    OLFR1, OR17-4
  • Links
    NCBI Gene ID: 4991
    neXtProt AC: NX_P34982
    UniProt: P34982

  • Chr Location
    17p13.3; chr17:3088484-3104422 (-)  GRCh38
  • Human Ortholog
    OR1D4, olfactory receptor family 1 subfamily D member 4
  • Synonyms
    OR17-30
  • Links
    NCBI Gene ID: 653166
    UniProt: P47884

  • Chr Location
    17p13.3; chr17:3240676-3241614 (+)  GRCh38
  • Human Ortholog
    OR1D5, olfactory receptor family 1 subfamily D member 5
  • Synonyms
    C17orf2, OR17-2, OR17-30, OR17-31, OR1D4
  • Links
    NCBI Gene ID: 8386
    neXtProt AC: NX_P58170
    UniProt: P58170

  • Chr Location
    17p13.3; chr17:3062669-3063607 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258153 NCBI Gene Model | MGI Sequence Detail 939 C57BL/6J ±  kb
transcript NM_001011851 RefSeq | MGI Sequence Detail 939 Not Specified  
polypeptide NP_001011851 RefSeq | MGI Sequence Detail 312 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 25
    Gene Ontology 3
    Phenotypes 9
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory