Or1p1b Pseudogene Detail

Summary

• Symbol
  Or1p1b
• Name
  olfactory receptor family 1 subfamily P member 1B
• Synonyms
  GA_x6K02T2P1NL-4385196-4386167, MOR133-5P, Olfr404-ps1

• Feature Type
  polymorphic pseudogene
  BioType Conflict
  
• IDs
  MGI:3030238
  NCBI Gene: 257920
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:74130392-74131330 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 45.76 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  15 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030238	polymorphic pseudogene	Chr11:74130392-74131363 (+)
129S1/SvImJ	ENSMUSG00200048900	protein coding gene	Chr11:71177264-71178235 (+)
A/J	ENSMUSG00195052330	protein coding gene	Chr11:71121371-71122342 (+)
AKR/J	ENSMUSG00220043688	protein coding gene	Chr11:71350218-71351189 (+)
BALB/cJ	ENSMUSG00180038447	protein coding gene	Chr11:71271428-71272399 (+)
C3H/HeJ	ENSMUSG00175041664	protein coding gene	Chr11:71217958-71218929 (+)
C57BL/6NJ	ENSMUSG00215053062	protein coding gene	Chr11:70901193-70902164 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005053584	protein coding gene	Chr11:70817780-70818751 (+)
CBA/J	ENSMUSG00210050674	protein coding gene	Chr11:71072678-71073649 (+)
DBA/2J	ENSMUSG00185043593	protein coding gene	Chr11:71353968-71354939 (+)
FVB/NJ	ENSMUSG00205025775	protein coding gene	Chr11:71187632-71188603 (+)
JF1/MsJ	ENSUMUG00000045198	protein coding gene	Chr11:71761511-71762482 (+)
LP/J	ENSMUSG00230041133	protein coding gene	Chr11:72384680-72385651 (+)
NOD/ShiLtJ	ENSMUSG00190053944	protein coding gene	Chr11:71363333-71364304 (+)
NZO/HlLtJ	ENSMUSG00225037685	protein coding gene	Chr11:74590389-74591360 (+)
PWK/PhJ	ENSLUMG00010043715	protein coding gene	Chr11:71297005-71297976 (+)
SPRET/EiJ	ENSMSPG00010048620	protein coding gene	Chr11:71679176-71680147 (+)
WSB/EiJ	ENSIUOG00005048197	protein coding gene	Chr11:71287760-71288731 (+)

Homology

• Gene Tree
  Or1p1b
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Or1p1b
• Find Mice (IMSR)
  12 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  3

• Ensembl
  ENSMUSG00000083188 (Evidence)
• NCBI Gene
  257920

Representative Sequences			Length	Strain/Species
genomic	257920	NCBI Gene Model | MGI Sequence Detail	939	C57BL/6J
transcript	NR_190755	RefSeq | MGI Sequence Detail	1085	C57BL/6
polypeptide	NP_001416591	RefSeq | MGI Sequence Detail	323	Not Specified

Other
Accession IDs

MGI:7277037

References

• Summaries
  All 11

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42