Or5ae1 Gene Detail

Summary

• Symbol
  Or5ae1
• Name
  olfactory receptor family 5 subfamily AE member 1
• Synonyms
  GA_x6K02T2NHDJ-11170115-11169168, MOR254-1, Olfr290

• Feature Type
  protein coding gene
• IDs
  MGI:3030124
  NCBI Gene: 258411
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr7:84564989-84565936 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 48.38 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  138 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030124	protein coding gene	Chr7:84562283-84570069 (+)
129S1/SvImJ	ENSMUSG00200025169	protein coding gene	Chr7:71390202-71397974 (+)
A/J	ENSMUSG00195039315	protein coding gene	Chr7:75852528-75860276 (+)
AKR/J	ENSMUSG00220038262	protein coding gene	Chr7:69389134-69396884 (+)
BALB/cJ	ENSMUSG00180036058	protein coding gene	Chr7:72558105-72565855 (+)
C3H/HeJ	ENSMUSG00175032592	protein coding gene	Chr7:73283659-73291431 (+)
C57BL/6NJ	ENSMUSG00215024261	protein coding gene	Chr7:72397745-72405527 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0029951	protein coding gene	Chr7:87274531-87371802 (+)
CAST/EiJ	ENSTCUG00005043460	protein coding gene	Chr7:75846039-75853818 (+)
CBA/J	ENSMUSG00210034521	protein coding gene	Chr7:73152028-73159800 (+)
DBA/2J	ENSMUSG00185041526	protein coding gene	Chr7:77457287-77465061 (+)
FVB/NJ	ENSMUSG00205021838	protein coding gene	Chr7:73109003-73116753 (+)
JF1/MsJ	ENSUMUG00000009242	protein coding gene	Chr7:82157777-82165556 (+)
LP/J	ENSMUSG00230015042	protein coding gene	Chr7:83546617-83554391 (+)
NOD/ShiLtJ	ENSMUSG00190022218	protein coding gene	Chr7:73316528-73324278 (+)
NZO/HlLtJ	ENSMUSG00225011131	protein coding gene	Chr7:81821496-81829272 (+)
PWK/PhJ	no annotation
SPRET/EiJ	ENSMSPG00010011739	protein coding gene	Chr7:72191369-72201045 (+)
WSB/EiJ	ENSIUOG00005032524	protein coding gene	Chr7:73645255-73653021 (+)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  25 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Endonuclease-mediated
  1
• Radiation induced
  3
• Genomic Mutations
  4 involving Or5ae1
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  23 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  17
• GO References
  7

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  36
• RefSeq
  2
• UniProt
  2
• CCDS
  CCDS21421.1

• Ensembl
  ENSMUSG00000070459 (Evidence), ENSMUSG00000116179 (Evidence)
• NCBI Gene
  258411

Representative Sequences			Length	Strain/Species
genomic	258411	NCBI Gene Model | MGI Sequence Detail	948	C57BL/6J
transcript	NM_146416	RefSeq | MGI Sequence Detail	948	C57BL/6
polypeptide	NP_666528	RefSeq | MGI Sequence Detail	315	C57BL/6

Protein
Information

• UniProt
  2 Sequences
• InterPro Domains
  IPR017452 GPCR, rhodopsin-like, 7TM
  IPR000276 G protein-coupled receptor, rhodopsin-like
  IPR050516 Olfactory G-protein coupled receptor
  IPR000725 Olfactory receptor
• GlyGen
  Q7TS13 1 site

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

Other
Accession IDs

MGI:7276922

References

• Summaries
  All 43

  Gene Ontology 7

  Phenotypes 25
• Earliest
  J:141526 Russell LB, et al., Analysis of the albino-locus region of the mouse. III. Time of death of prenatal lethals. Genetics. 1979 May;92(1):205-13
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42