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Or5k1 Gene Detail
Summary
  • Symbol
    Or5k1
  • Name
    olfactory receptor family 5 subfamily K member 1
  • Synonyms
    GA_x54KRFPKG5P-54960233-54959268, MOR184-3, Olfr173
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030007
    NCBI Gene: 259002
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:58617142-58618305 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 16, 34.83 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    83 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030007
protein coding gene Chr16:58615570-58620631 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022908
protein coding gene Chr16:57982360-57991709 (-)
A/J MGP_AJ_G0022876
protein coding gene Chr16:55516294-55520879 (-)
AKR/J MGP_AKRJ_G0022848
protein coding gene Chr16:57232110-57235903 (-)
BALB/cJ MGP_BALBcJ_G0022876
protein coding gene Chr16:55593123-55600415 (-)
C3H/HeJ MGP_C3HHeJ_G0022639
protein coding gene Chr16:57458548-57463944 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023324
protein coding gene Chr16:59603170-59607989 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020834
protein coding gene Chr16:55037919-55041532 (-)
CAST/EiJ MGP_CASTEiJ_G0022166
protein coding gene Chr16:57795413-57799770 (-)
CBA/J MGP_CBAJ_G0022611
protein coding gene Chr16:61986208-61989263 (-)
DBA/2J MGP_DBA2J_G0022743
protein coding gene Chr16:55231885-55232853 (-)
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0022737
protein coding gene Chr16:62354003-62357006 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023339
protein coding gene Chr16:57369251-57372687 (-)
PWK/PhJ MGP_PWKPhJ_G0021905
protein coding gene Chr16:55527309-55541473 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021734
protein coding gene Chr16:57121761-57129107 (-)
WSB/EiJ MGP_WSBEiJ_G0022209
protein coding gene Chr16:57419740-57424688 (-)



Homology
more
  • Human Ortholog
    OR5K1, olfactory receptor family 5 subfamily K member 1
  • Vertebrate Orthologs
    15
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR5K1, olfactory receptor family 5 subfamily K member 1
  • Synonyms
    HSHTPCRX10, HTPCRX10, OR3-8
  • Links
    NCBI Gene ID: 26339
    neXtProt AC: NX_Q8NHB7
    UniProt: Q8NHB7

  • Chr Location
    3q11.2; chr3:98463201-98472924 (+)  GRCh38

  • Human Ortholog
    OR5K2, olfactory receptor family 5 subfamily K member 2
  • Synonyms
    OR3-9
  • Links
    NCBI Gene ID: 402135
    neXtProt AC: NX_Q8NHB8
    UniProt: Q8NHB8

  • Chr Location
    3q11.2; chr3:98497681-98498631 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 259002 NCBI Gene Model | MGI Sequence Detail 1164 C57BL/6J ±  kb
transcript NM_147000 RefSeq | MGI Sequence Detail 1164 C57BL/6  
polypeptide NP_667211 RefSeq | MGI Sequence Detail 321 C57BL/6  
For the selected sequence
Protein
Information
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  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Gene Ontology 2
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/21/2024
MGI 6.23
The Jackson Laboratory