E330034L11Rik Gene Detail

Summary

• Symbol
  E330034L11Rik
• Name
  RIKEN cDNA E330034L11 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3026962
  NCBI Gene: 399583
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:95546615-95548356 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  15 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3026962	lncRNA gene	Chr3:95546615-95548356 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0001209	unclassified gene	Chr3:96401362-96404623 (+)
A/J	MGP_AJ_G0001191	unclassified gene	Chr3:93391540-93393276 (+)
AKR/J	MGP_AKRJ_G0001176	unclassified gene	Chr3:95564051-95565784 (+)
BALB/cJ	MGP_BALBcJ_G0001185	unclassified gene	Chr3:93168939-93170667 (+)
C3H/HeJ	MGP_C3HHeJ_G0001163	unclassified gene	Chr3:95860450-95862189 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001299	unclassified gene	Chr3:99946555-99958049 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001007	unclassified gene	Chr3:89720549-89722105 (+)
CAST/EiJ	MGP_CASTEiJ_G0001145	unclassified gene	Chr3:95123260-95125095 (+)
CBA/J	MGP_CBAJ_G0001155	unclassified gene	Chr3:103601752-103603484 (+)
DBA/2J	MGP_DBA2J_G0001159	unclassified gene	Chr3:92679507-92681457 (+)
FVB/NJ	MGP_FVBNJ_G0001169	unclassified gene	Chr3:90752951-90754700 (+)
LP/J	MGP_LPJ_G0001217	unclassified gene	Chr3:97712964-97714733 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0001158	unclassified gene	Chr3:109714617-109716359 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001291	unclassified gene	Chr3:95212778-95214504 (+)
PWK/PhJ	MGP_PWKPhJ_G0001103	unclassified gene	Chr3:92567495-92569226 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0001078	unclassified gene	Chr3:93492165-93493957 (+)
WSB/EiJ	MGP_WSBEiJ_G0001163	unclassified gene	Chr3:95596226-95598841 (+)

Homology

• Gene Tree
  E330034L11Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000106383 (Evidence)
• NCBI Gene
  399583

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000106383	Ensembl Gene Model | MGI Sequence Detail	1742	C57BL/6J
transcript	AK087876	GenBank | ENA | DDBJ | MGI Sequence Detail	1748	C57BL/6J

Molecular
Reagents

• All nucleic 4

  cDNA 4

References

• Summaries
  All 9
• Earliest
  J:57656 Lennon G, et al., WashU-HHMI Mouse EST Project. Database Download. 1999;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;