Kank4os Gene Detail

Summary

• Symbol
  Kank4os
• Name
  KN motif and ankyrin repeat domains 4, opposite strand
• Synonyms
  A730085A09Rik

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3026921
  NCBI Gene: 399570
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:98681958-98687137 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 45.60 cM
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  340 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3026921	antisense lncRNA gene	Chr4:98681958-98687274 (+)
129S1/SvImJ	ENSMUSG00200030518	lncRNA gene	Chr4:93662020-93667420 (+)
A/J	ENSMUSG00195008611	lncRNA gene	Chr4:94191750-94197151 (+)
AKR/J	ENSMUSG00220006783	lncRNA gene	Chr4:93667644-93672776 (+)
BALB/cJ	ENSMUSG00180034039	lncRNA gene	Chr4:93137143-93142544 (+)
C3H/HeJ	ENSMUSG00175015084	lncRNA gene	Chr4:94099401-94104802 (+)
C57BL/6NJ	ENSMUSG00215023891	lncRNA gene	Chr4:94055616-94060748 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003524	antisense lncRNA gene	Chr4:90919117-90924488 (+)
CAST/EiJ	ENSTCUG00005007417	lncRNA gene	Chr4:93373373-93378798 (+)
CBA/J	ENSMUSG00210029733	lncRNA gene	Chr4:93664909-93670310 (+)
DBA/2J	ENSMUSG00185023027	lncRNA gene	Chr4:94453387-94458786 (+)
FVB/NJ	ENSMUSG00205016734	lncRNA gene	Chr4:92663479-92668611 (+)
JF1/MsJ	ENSUMUG00000041298	lncRNA gene	Chr4:94565760-94570945 (+)
LP/J	ENSMUSG00230023256	lncRNA gene	Chr4:97771575-97776975 (+)
NOD/ShiLtJ	ENSMUSG00190031865	lncRNA gene	Chr4:93134894-93140294 (+)
NZO/HlLtJ	ENSMUSG00225033177	lncRNA gene	Chr4:102904503-102909635 (+)
PWK/PhJ	ENSLUMG00010018426	lncRNA gene	Chr4:92272158-92277328 (+)
SPRET/EiJ	ENSMSPG00010008246	lncRNA gene	Chr4:94502308-94507900 (+)
WSB/EiJ	ENSIUOG00005003213	lncRNA gene	Chr4:93451140-93456541 (+)

Homology

• Gene Tree
  Kank4os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  2
• Gene trapped
  2
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  4 involving Kank4os
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  10

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000085843 (Evidence)
• NCBI Gene
  399570

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085843	Ensembl Gene Model | MGI Sequence Detail	5180	C57BL/6J
transcript	ENSMUST00000133455	Ensembl | MGI Sequence Detail	2251	Not Applicable

Molecular
Reagents

• All nucleic 10

  cDNA 10

References

• Summaries
  All 20

  Phenotypes 7
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12