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Fam178b Gene Detail
Summary
  • Symbol
    Fam178b
  • Name
    family with sequence similarity 178, member B
  • Synonyms
    1700024G10Rik, LOC381337, MGC:60970
  • Feature Type
    protein coding gene
  • IDs
    MGI:3026913
    NCBI Gene: 381337
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:36601773-36722264 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 15.33 cM, cytoband B
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    844 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3026913
 protein coding gene Chr1:36601773-36722271 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015929
 protein coding gene Chr1:35101197-35233814 (-)
A/J MGP_AJ_G0015913
 protein coding gene Chr1:34161040-34283555 (-)
AKR/J MGP_AKRJ_G0015868
 protein coding gene Chr1:34643493-34762747 (-)
BALB/cJ MGP_BALBcJ_G0015867
 protein coding gene Chr1:33850701-33972167 (-)
C3H/HeJ MGP_C3HHeJ_G0015700
 protein coding gene Chr1:34838825-34969539 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016320
 protein coding gene Chr1:36689684-36819468 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014042
 protein coding gene Chr1:31214015-31337098 (-)
CAST/EiJ MGP_CASTEiJ_G0015281
 protein coding gene Chr1:34725544-34851408 (-)
CBA/J MGP_CBAJ_G0015672
 protein coding gene Chr1:37644315-37797292 (-)
DBA/2J MGP_DBA2J_G0015773
 protein coding gene Chr1:33496468-33619634 (-)
FVB/NJ MGP_FVBNJ_G0015775
 protein coding gene Chr1:33020371-33141327 (-)
LP/J MGP_LPJ_G0015843
 protein coding gene Chr1:35470404-35602967 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015795
 protein coding gene Chr1:39870229-39999391 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016367
 protein coding gene Chr1:34678640-34808126 (-)
PWK/PhJ MGP_PWKPhJ_G0015064
 protein coding gene Chr1:33249650-33373554 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014846
 protein coding gene Chr1:34627521-34759651 (-)
WSB/EiJ MGP_WSBEiJ_G0015343
 protein coding gene Chr1:34627942-34762223 (-)



Homology
more
  • Human Ortholog
    FAM178B, family with sequence similarity 178 member B
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    FAM178B, family with sequence similarity 178 member B
  • Links
    NCBI Gene ID: 51252
    neXtProt AC: NX_Q8IXR5
    UniProt: Q8IXR5

  • Chr Location
    2q11.2; chr2:96875882-96986580 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    28
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000046337 Ensembl Gene Model | MGI Sequence Detail 120492 C57BL/6J ±  kb
transcript ENSMUST00000170295 Ensembl | MGI Sequence Detail 2286 Not Applicable  
polypeptide ENSMUSP00000132846 Ensembl | MGI Sequence Detail 523 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    cDNA 28

    Microarray probesets 3
Other
Accession IDs
less
MGI:1919099, MGI:2685836
References
more
  • Summaries
    All 32
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory