C230057A21Rik Gene Detail

Summary

• Symbol
  C230057A21Rik
• Name
  RIKEN cDNA C230057A21 gene
• Synonyms
  LOC381434

• Feature Type
  lncRNA gene
• IDs
  MGI:2686488
  NCBI Gene: 102635252
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:8797584-8801684 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  256 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2686488	lncRNA gene	Chr3:8797414-8801699 (-)
129S1/SvImJ	ENSMUSG00200000849	lncRNA gene	Chr3:5461176-5464666 (-)
A/J	ENSMUSG00195001237	lncRNA gene	Chr3:5801365-5804855 (-)
AKR/J	ENSMUSG00220017165	lncRNA gene	Chr3:5803619-5807109 (-)
BALB/cJ	ENSMUSG00180007353	lncRNA gene	Chr3:5812974-5816464 (-)
C3H/HeJ	ENSMUSG00175005049	lncRNA gene	Chr3:5809905-5813395 (-)
C57BL/6NJ	ENSMUSG00215005717	lncRNA gene	Chr3:5826884-5830374 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005565	lincRNA gene	Chr3:4806994-4810525 (-)
CAST/EiJ	ENSTCUG00005000287	lncRNA gene	Chr3:5870919-5874410 (-)
CBA/J	ENSMUSG00210000940	lncRNA gene	Chr3:5795076-5798566 (-)
DBA/2J	ENSMUSG00185000543	lncRNA gene	Chr3:5806487-5809977 (-)
FVB/NJ	ENSMUSG00205006004	lncRNA gene	Chr3:5627148-5630638 (-)
JF1/MsJ	ENSUMUG00000010712	lncRNA gene	Chr3:5682064-5685262 (-)
LP/J	ENSMUSG00230000208	lncRNA gene	Chr3:7722223-7725713 (-)
NOD/ShiLtJ	ENSMUSG00190023365	lncRNA gene	Chr3:5896718-5900208 (-)
NZO/HlLtJ	ENSMUSG00225000879	lncRNA gene	Chr3:10295142-10298632 (-)
PWK/PhJ	ENSLUMG00010008415	lncRNA gene	Chr3:5738698-5741896 (-)
SPRET/EiJ	ENSMSPG00010000123	lncRNA gene	Chr3:5647657-5651156 (-)
WSB/EiJ	ENSIUOG00005000778	lncRNA gene	Chr3:5815688-5819178 (-)

Homology

• Gene Tree
  C230057A21Rik
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  27
• RefSeq
  2

• Ensembl
  ENSMUSG00000103346 (Evidence)
• NCBI Gene
  102635252

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103346	Ensembl Gene Model | MGI Sequence Detail	4101	C57BL/6J
transcript	ENSMUST00000194944	Ensembl | MGI Sequence Detail	3331	Not Applicable

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 8
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;