Platr26 MGI Mouse Gene Detail - MGI:2686477 - pluripotency associated transcript 26

Sequence Map

Chr2:71549761-71561310 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2686477	lncRNA gene	Chr2:71486057-71561596 (+)
129S1/SvImJ	ENSMUSG00200037086	lncRNA gene	Chr2:68622250-68633884 (+)
A/J	ENSMUSG00195022833	lncRNA gene	Chr2:68770481-68782183 (+)
AKR/J	ENSMUSG00220042240	lncRNA gene	Chr2:68735199-68746899 (+)
BALB/cJ	ENSMUSG00180041830	lncRNA gene	Chr2:68724314-68735998 (+)
C3H/HeJ	ENSMUSG00175038377	lncRNA gene	Chr2:68838170-68849808 (+)
C57BL/6NJ	ENSMUSG00215031463	lncRNA gene	Chr2:68660069-68671710 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005394	lincRNA gene	Chr2:66272681-66284054 (+)
CAST/EiJ	ENSTCUG00005009379	lncRNA gene	Chr2:68147005-68158749 (+)
CBA/J	ENSMUSG00210038708	lncRNA gene	Chr2:68880965-68892603 (+)
DBA/2J	ENSMUSG00185041617	lncRNA gene	Chr2:68716685-68728327 (+)
FVB/NJ	ENSMUSG00205036896	lncRNA gene	Chr2:68180597-68192289 (+)
JF1/MsJ	ENSUMUG00000006944	lncRNA gene	Chr2:68380223-68391900 (+)
LP/J	ENSMUSG00230022957	lncRNA gene	Chr2:70523927-70535615 (+)
NOD/ShiLtJ	ENSMUSG00190041436	lncRNA gene	Chr2:68803475-68815165 (+)
NZO/HlLtJ	ENSMUSG00225015307	lncRNA gene	Chr2:78264271-78275907 (+)
PWK/PhJ	ENSLUMG00010033364	lncRNA gene	Chr2:68612495-68624181 (+)
SPRET/EiJ	ENSMSPG00010036082	lncRNA gene	Chr2:70005587-70017339 (+)
WSB/EiJ	ENSIUOG00005020254	lncRNA gene	Chr2:68845346-68856997 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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			Length	Strain/Species	Flank
genomic	381371	NCBI Gene Model \| MGI Sequence Detail	11550	C57BL/6J	± kb
transcript	NR_037979	RefSeq \| MGI Sequence Detail	643	C57BL/6
polypeptide	Q6R5G4	UniProt \| EBI \| MGI Sequence Detail	120	Not Applicable

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Summaries

All 19

Phenotypes 8
Earliest

J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
Latest

J:241492 Bergmann JH, et al., Regulation of the ESC transcriptome by nuclear long noncoding RNAs. Genome Res. 2015 Sep;25(9):1336-46

TSS for Platr26:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr18282	Chr2:71549729-71549737 (+)	-28 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 09/08/2026 MGI 6.24