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Gm1553 Gene Detail
Summary
  • Symbol
    Gm1553
  • Name
    predicted gene 1553
  • Synonyms
    Lcrn, LOC380643
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686399
    NCBI Gene: 432480
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:82322371-82328452 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686399
 protein coding gene Chr10:82322367-82328452 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017576
 protein coding gene Chr10:83162023-83169433 (-)
A/J MGP_AJ_G0017555
 protein coding gene Chr10:80353336-80359416 (-)
AKR/J MGP_AKRJ_G0017515
 protein coding gene Chr10:82571581-82577661 (-)
BALB/cJ MGP_BALBcJ_G0017518
 protein coding gene Chr10:80604887-80610967 (-)
C3H/HeJ MGP_C3HHeJ_G0017340
 protein coding gene Chr10:82658945-82665025 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017975
 protein coding gene Chr10:86121026-86127980 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0016908
 protein coding gene Chr10:82581034-82588209 (-)
CBA/J MGP_CBAJ_G0017310
 protein coding gene Chr10:89623857-89629937 (-)
DBA/2J MGP_DBA2J_G0017416
 protein coding gene Chr10:79553562-79559642 (-)
FVB/NJ MGP_FVBNJ_G0017411
 protein coding gene Chr10:78789959-78796039 (-)
LP/J MGP_LPJ_G0017489
 protein coding gene Chr10:83798629-83804709 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017439
 protein coding gene Chr10:91287251-91291788 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018012
 protein coding gene Chr10:82503794-82509874 (-)
PWK/PhJ MGP_PWKPhJ_G0016689
 protein coding gene Chr10:79428246-79434371 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016479
 protein coding gene Chr10:81229741-81235823 (-)
WSB/EiJ MGP_WSBEiJ_G0016967
 protein coding gene Chr10:82597690-82610603 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094186 Ensembl Gene Model | MGI Sequence Detail 6082 C57BL/6J ±  kb
transcript ENSMUST00000177934 Ensembl | MGI Sequence Detail 658 Not Applicable  
polypeptide ENSMUSP00000135907 Ensembl | MGI Sequence Detail 94 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/07/2024
MGI 6.23 		The Jackson Laboratory