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Gm1553 Gene Detail
Summary
  • Symbol
    Gm1553
  • Name
    predicted gene 1553
  • Synonyms
    Lcrn, LOC380643
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686399
    NCBI Gene: 432480
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:82322371-82328452 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    135 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686399
 protein coding gene Chr10:82322367-82328452 (-)
129S1/SvImJ ENSMUSG00200042892
 protein coding gene Chr10:78750517-78756595 (-)
A/J ENSMUSG00195048579
 protein coding gene Chr10:79192396-79198474 (-)
AKR/J ENSMUSG00220048469
 protein coding gene Chr10:78801883-78807961 (-)
BALB/cJ ENSMUSG00180050585
 protein coding gene Chr10:79202785-79208863 (-)
C3H/HeJ ENSMUSG00175047664
 protein coding gene Chr10:79073553-79079631 (-)
C57BL/6NJ ENSMUSG00215048082
 protein coding gene Chr10:78808669-78814750 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005050857
 protein coding gene Chr10:78558055-78564133 (-)
CBA/J ENSMUSG00210045875
 protein coding gene Chr10:78929559-78935637 (-)
DBA/2J ENSMUSG00185050150
 protein coding gene Chr10:79139116-79145194 (-)
FVB/NJ ENSMUSG00205050076
 protein coding gene Chr10:78856573-78862651 (-)
JF1/MsJ ENSUMUG00000045674
 protein coding gene Chr10:80525379-80531458 (-)
LP/J ENSMUSG00230015026
 protein coding gene Chr10:81041551-81047629 (-)
NOD/ShiLtJ ENSMUSG00190029465
 protein coding gene Chr10:79185609-79191687 (-)
NZO/HlLtJ ENSMUSG00225050455
 protein coding gene Chr10:85328036-85334114 (-)
PWK/PhJ ENSLUMG00010048253
 protein coding gene Chr10:78848554-78854632 (-)
SPRET/EiJ ENSMSPG00010045079
 protein coding gene Chr10:80326842-80331366 (-)
WSB/EiJ ENSIUOG00005049136
 protein coding gene Chr10:78950198-78956277 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094186 Ensembl Gene Model | MGI Sequence Detail 6082 C57BL/6J ±  kb
transcript ENSMUST00000177934 Ensembl | MGI Sequence Detail 658 Not Applicable  
polypeptide ENSMUSP00000135907 Ensembl | MGI Sequence Detail 94 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:122599 Ozyildirim AM, et al., The lacrimal gland transcriptome is an unusually rich source of rare and poorly characterized gene transcripts. Invest Ophthalmol Vis Sci. 2005 May;46(5):1572-80
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory