Gm1401 Pseudogene Detail

Summary

• Symbol
  Gm1401
• Name
  predicted gene 1401
• Synonyms
  LOC384363

• Feature Type
  pseudogene
• IDs
  MGI:2686247
  NCBI Gene: 102634733
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr6:33224263-33225034 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, 14.58 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  151 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2686247	pseudogene	Chr6:33224203-33226008 (-)
129S1/SvImJ	ENSMUSG00200046847	pseudogene	Chr6:30282716-30283487 (-)
A/J	ENSMUSG00195043557	pseudogene	Chr6:30248614-30249385 (-)
AKR/J	ENSMUSG00220004295	pseudogene	Chr6:29843526-29844297 (-)
BALB/cJ	ENSMUSG00180048040	pseudogene	Chr6:30380203-30380974 (-)
C3H/HeJ	ENSMUSG00175019492	pseudogene	Chr6:30245153-30245924 (-)
C57BL/6NJ	ENSMUSG00215028263	pseudogene	Chr6:30278003-30278775 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011851	pseudogene	Chr6:28050302-28051291 (-)
CAST/EiJ	ENSTCUG00005029052	pseudogene	Chr6:29816556-29817339 (-)
CBA/J	ENSMUSG00210052569	pseudogene	Chr6:30278746-30279517 (-)
DBA/2J	ENSMUSG00185050478	pseudogene	Chr6:30358807-30359578 (-)
FVB/NJ	ENSMUSG00205050240	pseudogene	Chr6:30327000-30327771 (-)
JF1/MsJ	ENSUMUG00000041052	pseudogene	Chr6:30049892-30050663 (-)
LP/J	ENSMUSG00230044667	pseudogene	Chr6:31299152-31299923 (-)
NOD/ShiLtJ	ENSMUSG00190028215	pseudogene	Chr6:30127856-30128627 (-)
NZO/HlLtJ	ENSMUSG00225010749	pseudogene	Chr6:33263125-33263896 (-)
PWK/PhJ	ENSLUMG00010025686	pseudogene	Chr6:29810360-29811143 (-)
SPRET/EiJ	ENSMSPG00010023830	pseudogene	Chr6:30240262-30241264 (-)
WSB/EiJ	ENSIUOG00005036445	pseudogene	Chr6:30415972-30416743 (-)

Homology

• Gene Tree
  Gm1401
  

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000082217 (Evidence)
• NCBI Gene
  102634733

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082217	Ensembl Gene Model | MGI Sequence Detail	772	C57BL/6J
transcript	ENSMUST00000122048	Ensembl | MGI Sequence Detail	772	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for Gm1401:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr60220	Chr6:33225810-33225829 (-)	-786 bp