Gm1070 MGI Mouse Gene Detail - MGI:2685916

Symbol

Gm1070
Name

predicted gene 1070
Synonyms

LOC381785

Feature Type

protein coding gene

BioType Conflict
IDs

MGI:2685916
NCBI Gene: 381785
Alliance

genome feature page

Sequence Map

Chr6:71277109-71277690 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 6, 32.14 cM
Mapping Data

1 experiment

SNPs within 2kb

141 from dbSNP Build 142
Strain Annotations

31

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685916	protein coding gene	Chr6:71270749-71279864 (+)
129S1/SvImJ	ENSMUSG00200013408	pseudogene	Chr6:68173896-68183011 (+)
129S1/SvImJ	ENSMUSG00200009991	protein coding gene	Chr6:68173869-68183011 (+)
A/J	ENSMUSG00195040976	protein coding gene	Chr6:67935848-67944990 (+)
A/J	ENSMUSG00195046256	pseudogene	Chr6:67935875-67944990 (+)
AKR/J	ENSMUSG00220039214	protein coding gene	Chr6:66883997-66891496 (+)
AKR/J	ENSMUSG00220046128	pseudogene	Chr6:66884024-66891496 (+)
BALB/cJ	ENSMUSG00180037534	pseudogene	Chr6:68290917-68300033 (+)
BALB/cJ	ENSMUSG00180035392	protein coding gene	Chr6:68290890-68300033 (+)
C3H/HeJ	ENSMUSG00175011891	protein coding gene	Chr6:109143994-109153169 (-)
C3H/HeJ	ENSMUSG00175013997	pseudogene	Chr6:109143993-109153142 (-)
C57BL/6NJ	ENSMUSG00215044181	pseudogene	Chr6:68263587-68272704 (+)
C57BL/6NJ	ENSMUSG00215042266	protein coding gene	Chr6:68263560-68272704 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006360	lincRNA gene	Chr6:68190864-68200096 (+)
CAST/EiJ	ENSTCUG00005035187	pseudogene	Chr6:68415913-68423469 (+)
CBA/J	ENSMUSG00210040333	pseudogene	Chr6:68097613-68106762 (+)
CBA/J	ENSMUSG00210038066	protein coding gene	Chr6:68097586-68106761 (+)
DBA/2J	ENSMUSG00185041161	protein coding gene	Chr6:68657647-68666822 (+)
DBA/2J	ENSMUSG00185043591	pseudogene	Chr6:68657674-68666823 (+)
FVB/NJ	ENSMUSG00205041469	pseudogene	Chr6:67386421-67395536 (+)
FVB/NJ	ENSMUSG00205030403	protein coding gene	Chr6:67386394-67395536 (+)
JF1/MsJ	ENSUMUG00000041545	pseudogene	Chr6:67703226-67710698 (+)
LP/J	ENSMUSG00230020999	protein coding gene	Chr6:69768866-69778008 (+)
LP/J	ENSMUSG00230024388	pseudogene	Chr6:69768893-69778008 (+)
NOD/ShiLtJ	ENSMUSG00190044629	pseudogene	Chr6:67622963-67630436 (+)
NOD/ShiLtJ	ENSMUSG00190031169	protein coding gene	Chr6:67622936-67630436 (+)
NZO/HlLtJ	ENSMUSG00225006820	pseudogene	Chr6:71742804-71751919 (+)
NZO/HlLtJ	ENSMUSG00225006550	protein coding gene	Chr6:71742777-71751919 (+)
PWK/PhJ	ENSLUMG00010021908	pseudogene	Chr6:67067583-67075031 (+)
SPRET/EiJ	ENSMSPG00010028067	pseudogene	Chr6:68958718-68967941 (+)
WSB/EiJ	ENSIUOG00005023394	pseudogene	Chr6:68652155-68659701 (+)

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Gene Tree

Gm1070

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Phenotype Summary

4 phenotype references

All Mutations and Alleles

6
Gene trapped

4
Targeted

2
Find Mice (IMSR)

8 strains or lines available

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

597
cDNA Data

16

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas

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All Sequences

40
RefSeq

3
UniProt

1

Ensembl

ENSMUSG00000073018 (Evidence)
NCBI Gene

381785

			Length	Strain/Species	Flank
genomic	ENSMUSG00000073018	Ensembl Gene Model \| MGI Sequence Detail	582	C57BL/6J	± kb
transcript	ENSMUST00000238902	Ensembl \| MGI Sequence Detail	582	Not Applicable
polypeptide	NP_001344834	RefSeq \| MGI Sequence Detail	194	C57BL/6

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UniProt

1 Sequence

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All nucleic 16

cDNA 16

Summaries

All 16

Phenotypes 4
Earliest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
Latest

J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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