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Ccnjl Gene Detail
Summary
  • Symbol
    Ccnjl
  • Name
    cyclin J-like
  • Synonyms
    LOC380694
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685723
    NCBI Gene: 380694
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:43419611-43477824 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 11, 25.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1811 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685723
protein coding gene Chr11:43419576-43477826 (+)
129S1/SvImJ MGP_129S1SvImJ_G0018174
protein coding gene Chr11:42297261-42363526 (+)
A/J MGP_AJ_G0018146
protein coding gene Chr11:40682663-40749617 (+)
AKR/J MGP_AKRJ_G0018110
protein coding gene Chr11:41879627-41942267 (+)
BALB/cJ MGP_BALBcJ_G0018115
protein coding gene Chr11:40864579-40921959 (+)
C3H/HeJ MGP_C3HHeJ_G0017928
protein coding gene Chr11:41908674-41971083 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018569
protein coding gene Chr11:43590595-43652098 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016224
protein coding gene Chr11:38745990-38805207 (+)
CAST/EiJ MGP_CASTEiJ_G0017492
protein coding gene Chr11:41954413-42022029 (+)
CBA/J MGP_CBAJ_G0017901
protein coding gene Chr11:45598680-45675612 (+)
DBA/2J MGP_DBA2J_G0018011
protein coding gene Chr11:40468227-40526008 (+)
FVB/NJ MGP_FVBNJ_G0018005
protein coding gene Chr11:40151130-40212082 (+)
LP/J MGP_LPJ_G0018083
protein coding gene Chr11:42542652-42607609 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018029
protein coding gene Chr11:47240778-47322468 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018608
protein coding gene Chr11:42033101-42095138 (+)
PWK/PhJ MGP_PWKPhJ_G0017273
protein coding gene Chr11:40489069-40548477 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017065
protein coding gene Chr11:41826169-41890548 (+)
WSB/EiJ MGP_WSBEiJ_G0017541
protein coding gene Chr11:41675747-41738466 (+)



Homology
more
  • Human Ortholog
    CCNJL, cyclin J like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCNJL, cyclin J like
  • Links
    NCBI Gene ID: 79616
    neXtProt AC: NX_Q8IV13
    UniProt: Q8IV13

  • Chr Location
    5q33.3; chr5:160249083-160345396 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Ccnjl
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044707 Ensembl Gene Model | MGI Sequence Detail 58214 C57BL/6J ±  kb
transcript ENSMUST00000050574 Ensembl | MGI Sequence Detail 2672 Not Applicable  
polypeptide ENSMUSP00000058111 Ensembl | MGI Sequence Detail 387 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:344223 Zhang W, et al., NLRP14 deficiency causes female infertility with oocyte maturation defects and early embryonic arrest by impairing cytoplasmic UHRF1 abundance. Cell Rep. 2023 Dec 26;42(12):113531

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory