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Gm839 Gene Detail
Summary
  • Symbol
    Gm839
  • Name
    predicted gene 839
  • Synonyms
    LOC330379
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2685685
    NCBI Gene: 330379
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr6:89189179-89193161 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 39.85 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685685
 lncRNA gene Chr6:89188147-89193219 (-)
129S1/SvImJ MGP_129S1SvImJ_G0007015
 lincRNA gene Chr6:90659896-90664974 (-)
A/J MGP_AJ_G0007011
 lincRNA gene Chr6:87202800-87207873 (-)
AKR/J MGP_AKRJ_G0006980
 lincRNA gene Chr6:89619697-89675166 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0006937
 lincRNA gene Chr6:94771745-94818198 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007152
 lincRNA gene Chr6:93043805-93101368 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0006933
 lincRNA gene Chr6:86442941-86448019 (-)
FVB/NJ MGP_FVBNJ_G0006957
 lincRNA gene Chr6:85645108-85650186 (-)
LP/J MGP_LPJ_G0007018
 lincRNA gene Chr6:90681219-90686297 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006937
 lincRNA gene Chr6:100736079-100741157 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0007157
 lincRNA gene Chr6:89516416-89521924 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    12
Sequences &
Gene Models
less
  • All Sequences
    20
  • RefSeq
    1
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 330379 NCBI Gene Model | MGI Sequence Detail 3983 C57BL/6J ±  kb
transcript NR_033190 RefSeq | MGI Sequence Detail 753 Not Specified  
polypeptide Q6R5H6 UniProt | EBI | MGI Sequence Detail 123 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Phenotypes 5
  • Earliest
    J:87486 Akeson EC, Chromosomal inversion discovered in C3H/HeJ mice. JAX Notes. 2003;491:15
  • Latest
    J:330636 Iwata S, et al., An efficient i-GONAD method for creating and maintaining lethal mutant mice using an inversion balancer identified from the C3H/HeJJcl strain. G3 (Bethesda). 2021;11(8)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/23/2024
MGI 6.23 		The Jackson Laboratory