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A330043C09Rik Gene Detail
Summary
  • Symbol
    A330043C09Rik
  • Name
    RIKEN cDNA A330043C09 gene
  • Synonyms
    LOC329430
Location &
Maps
more
  • Sequence Map
    Chr2:74977183-75008066 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 44.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    892 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685671
 lncRNA gene Chr2:74977183-75008066 (-)
129S1/SvImJ ENSMUSG00200004424
 lncRNA gene Chr2:72026547-72057097 (-)
A/J ENSMUSG00195021299
 lncRNA gene Chr2:72173289-72203842 (-)
AKR/J ENSMUSG00220002553
 lncRNA gene Chr2:72137961-72168515 (-)
BALB/cJ ENSMUSG00180007043
 lncRNA gene Chr2:72126966-72157521 (-)
C3H/HeJ ENSMUSG00175011384
 lncRNA gene Chr2:72253430-72283936 (-)
C57BL/6NJ ENSMUSG00215030504
 lncRNA gene Chr2:72089666-72120210 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005411
 lincRNA gene Chr2:69965562-69996276 (-)
CAST/EiJ ENSTCUG00005031755
 lncRNA gene Chr2:71575105-71605874 (-)
CBA/J ENSMUSG00210002663
 lncRNA gene Chr2:72296064-72326563 (-)
DBA/2J ENSMUSG00185011743
 lncRNA gene Chr2:72131921-72162423 (-)
FVB/NJ ENSMUSG00205019827
 lncRNA gene Chr2:71583307-71613864 (-)
JF1/MsJ ENSUMUG00000042429
 lncRNA gene Chr2:71814461-71845255 (-)
LP/J ENSMUSG00230027567
 lncRNA gene Chr2:73931688-73962240 (-)
NOD/ShiLtJ ENSMUSG00190011391
 lncRNA gene Chr2:72206447-72236967 (-)
NZO/HlLtJ ENSMUSG00225015681
 lncRNA gene Chr2:81690071-81720609 (-)
PWK/PhJ ENSLUMG00010032848
 lncRNA gene Chr2:72053060-72084015 (-)
SPRET/EiJ ENSMSPG00010023494
 lncRNA gene Chr2:73444555-73475239 (-)
WSB/EiJ ENSIUOG00005011949
 lncRNA gene Chr2:72250030-72280590 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    32
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086044 Ensembl Gene Model | MGI Sequence Detail 30884 C57BL/6J ±  kb
transcript ENSMUST00000275625 Ensembl | MGI Sequence Detail 1680 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Genomic 2
    cDNA 1
References
more
  • Summaries
    All 16
    Phenotypes 6
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:308920 Bolt CC, et al., Mesomelic dysplasias associated with the HOXD locus are caused by regulatory reallocations. Nat Commun. 2021 Aug 18;12(1):5013
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory