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Zscan30 Gene Detail
Summary
  • Symbol
    Zscan30
  • Name
    zinc finger and SCAN domain containing 30
  • Synonyms
    C230097I24Rik, Zfp397os
Location &
Maps
more
  • Sequence Map
    Chr18:24097875-24104844 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 12.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    185 from dbSNP Build 142
  • Strain Annotations
    28
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685600
 protein coding gene Chr18:24065597-24120362 (-)
129S1/SvImJ ENSMUSG00200016492
 pseudogene Chr18:21064030-21117334 (-)
129S1/SvImJ ENSMUSG00200015894
 protein coding gene Chr18:21063927-21117417 (-)
A/J ENSMUSG00195002480
 pseudogene Chr18:21223217-21276066 (-)
AKR/J ENSMUSG00220011774
 pseudogene Chr18:21218870-21272186 (-)
AKR/J ENSMUSG00220010991
 protein coding gene Chr18:21218767-21272269 (-)
BALB/cJ ENSMUSG00180003528
 pseudogene Chr18:21671930-21725243 (-)
BALB/cJ ENSMUSG00180003278
 protein coding gene Chr18:21671827-21725326 (-)
C3H/HeJ ENSMUSG00175023911
 pseudogene Chr18:21180286-21233143 (-)
C57BL/6NJ ENSMUSG00215015792
 protein coding gene Chr18:20923616-20977122 (-)
C57BL/6NJ ENSMUSG00215023957
 pseudogene Chr18:20923719-20977039 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022044
 protein coding gene Chr18:20973345-20984254 (-)
CAST/EiJ ENSTCUG00005016334
 pseudogene Chr18:20921257-20970064 (-)
CBA/J ENSMUSG00210016032
 protein coding gene Chr18:21221446-21274930 (-)
CBA/J ENSMUSG00210016219
 pseudogene Chr18:21221549-21274847 (-)
DBA/2J ENSMUSG00185022076
 protein coding gene Chr18:21166635-21220123 (-)
DBA/2J ENSMUSG00185022627
 pseudogene Chr18:21166738-21220040 (-)
FVB/NJ ENSMUSG00205018104
 protein coding gene Chr18:20893089-20946585 (-)
FVB/NJ ENSMUSG00205023279
 pseudogene Chr18:20893192-20946502 (-)
JF1/MsJ ENSUMUG00000027126
 pseudogene Chr18:21266481-21322569 (-)
LP/J ENSMUSG00230006386
 pseudogene Chr18:23259963-23313273 (-)
LP/J ENSMUSG00230005786
 protein coding gene Chr18:23259860-23313356 (-)
NOD/ShiLtJ ENSMUSG00190006688
 protein coding gene Chr18:20981156-21034630 (-)
NOD/ShiLtJ ENSMUSG00190006958
 pseudogene Chr18:20981259-21034547 (-)
NZO/HlLtJ ENSMUSG00225025813
 pseudogene Chr18:23203558-23256409 (-)
PWK/PhJ ENSLUMG00010003670
 pseudogene Chr18:21449379-21506209 (-)
SPRET/EiJ ENSMSPG00010022226
 pseudogene Chr18:21389587-21438402 (-)
WSB/EiJ ENSIUOG00005002745
 pseudogene Chr18:20992695-21045418 (-)



Homology
more
  • Human Ortholog
    ZSCAN30, zinc finger and SCAN domain containing 30
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZSCAN30, zinc finger and SCAN domain containing 30
  • Synonyms
    ZNF397OS, ZNF917, ZNF-WYM
  • Links
    NCBI Gene ID: 100101467
    UniProt: Q86W11

  • Chr Location
    18q12.2; chr18:35251058-35290245 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    621
  • Tissues
    15
  • cDNA Data
    11
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024274 Ensembl Gene Model | MGI Sequence Detail 6970 C57BL/6J ±  kb
transcript ENSMUST00000115829 Ensembl | MGI Sequence Detail 1592 Not Applicable  
polypeptide NP_001357863 RefSeq | MGI Sequence Detail 535 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR003309 SCAN domain
    IPR050916 SCAN domain and C2H2-type zinc finger
    IPR038269 SCAN domain superfamily
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory