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Cd200l1 Gene Detail
Summary
  • Symbol
    Cd200l1
  • Name
    CD200 molecule like 1
  • Synonyms
    Gm609, iSEC1, LOC208166, LOC385647
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685455
    NCBI Gene: 208166
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:45232131-45313332 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 29.53 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    769 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685455
 protein coding gene Chr16:45232130-45313367 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022852
 protein coding gene Chr16:44206155-44274652 (-)
A/J MGP_AJ_G0022817
 protein coding gene Chr16:42230813-42306056 (-)
AKR/J MGP_AKRJ_G0022789
 protein coding gene Chr16:43613570-43695467 (-)
BALB/cJ MGP_BALBcJ_G0022818
 protein coding gene Chr16:42251343-42327896 (-)
C3H/HeJ MGP_C3HHeJ_G0022582
 protein coding gene Chr16:43780317-43842368 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023265
 protein coding gene Chr16:45200946-45278588 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0020779
 protein coding gene Chr16:42615826-42670849 (-)
CAST/EiJ MGP_CASTEiJ_G0022107
 protein coding gene Chr16:43959944-44040907 (-)
CBA/J MGP_CBAJ_G0022553
 protein coding gene Chr16:47117768-47194147 (-)
DBA/2J MGP_DBA2J_G0022685
 protein coding gene Chr16:41968270-42045181 (-)
FVB/NJ MGP_FVBNJ_G0022661
 protein coding gene Chr16:41881239-41957356 (-)
LP/J MGP_LPJ_G0022753
 protein coding gene Chr16:43938265-44021327 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0022679
 protein coding gene Chr16:46538480-46620480 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023280
 protein coding gene Chr16:43630245-43704878 (-)
PWK/PhJ MGP_PWKPhJ_G0021847
 protein coding gene Chr16:42336326-42408060 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021678
 protein coding gene Chr16:43558068-43607840 (-)
WSB/EiJ MGP_WSBEiJ_G0022152
 protein coding gene Chr16:43718968-43798191 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000053182 Ensembl Gene Model | MGI Sequence Detail 81202 C57BL/6J ±  kb
transcript ENSMUST00000114585 Ensembl | MGI Sequence Detail 2122 Not Applicable  
polypeptide ENSMUSP00000110233 Ensembl | MGI Sequence Detail 300 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
    IPR033321 OX-2 membrane glycoprotein, immunoglobulin variable domain
    IPR047164 OX-2 membrane glycoprotein-like
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
Other
Accession IDs
less
MGI:2686595
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 2
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:324898 Kojima T, et al., Novel CD200 homologues iSEC1 and iSEC2 are gastrointestinal secretory cell-specific ligands of inhibitory receptor CD200R. Sci Rep. 2016 Nov 7;6:36457
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory