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Rtp1 Gene Detail
Summary
  • Symbol
    Rtp1
  • Name
    receptor transporter protein 1
  • Synonyms
    LOC239766, LOC385871
Location &
Maps
more
  • Sequence Map
    Chr16:23247883-23252710 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 16, 14.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    293 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685450
 protein coding gene Chr16:23247883-23252710 (+)
129S1/SvImJ ENSMUSG00200041500
 protein coding gene Chr16:20251791-20256618 (+)
A/J ENSMUSG00195030883
 protein coding gene Chr16:19806299-19811126 (+)
AKR/J ENSMUSG00220044476
 protein coding gene Chr16:20125717-20130544 (+)
BALB/cJ ENSMUSG00180031642
 protein coding gene Chr16:20046891-20051718 (+)
C3H/HeJ ENSMUSG00175042798
 protein coding gene Chr16:20191812-20196639 (+)
C57BL/6NJ ENSMUSG00215027703
 protein coding gene Chr16:19919026-19923853 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0020617
 protein coding gene Chr16:20645530-20650370 (+)
CAST/EiJ ENSTCUG00005032436
 protein coding gene Chr16:20524248-20529100 (+)
CBA/J ENSMUSG00210042268
 protein coding gene Chr16:20213444-20218271 (+)
DBA/2J ENSMUSG00185033327
 protein coding gene Chr16:20152269-20157096 (+)
FVB/NJ ENSMUSG00205042883
 protein coding gene Chr16:20152952-20157779 (+)
JF1/MsJ ENSUMUG00000037060
 protein coding gene Chr16:20373344-20378192 (+)
LP/J ENSMUSG00230029768
 protein coding gene Chr16:22731236-22736063 (+)
NOD/ShiLtJ ENSMUSG00190026767
 protein coding gene Chr16:20293657-20298484 (+)
NZO/HlLtJ ENSMUSG00225035970
 protein coding gene Chr16:25982404-25987231 (+)
PWK/PhJ ENSLUMG00010028721
 protein coding gene Chr16:20197759-20202607 (+)
SPRET/EiJ ENSMSPG00010043290
 protein coding gene Chr16:20078636-20081291 (+)
WSB/EiJ ENSIUOG00005032666
 protein coding gene Chr16:20397328-20402155 (+)



Homology
more
  • Human Ortholog
    RTP1, receptor transporter protein 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RTP1, receptor transporter protein 1
  • Synonyms
    Z3CXXC1
  • Links
    NCBI Gene ID: 132112
    UniProt: P59025

  • Chr Location
    3q27.3; chr3:187197486-187201462 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit infertility and abnormal olfactory bulb development.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    599
  • Tissues
    1
  • cDNA Data
    6
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 239766 NCBI Gene Model | MGI Sequence Detail 4828 C57BL/6J ±  kb
    transcript NM_001004151 RefSeq | MGI Sequence Detail 3120 C57BL/6  
    polypeptide Q8C8C1 UniProt | EBI | MGI Sequence Detail 263 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 7
      cDNA 6
      Primer pair 1

      Microarray probesets 1
    Other
    Accession IDs
    less
    MGI:2686612
    References
    more
    • Summaries
      All 28
      Developmental Gene Expression 2
      Gene Ontology 4
      Phenotypes 6
    • Earliest
      J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
    • Latest
      J:324875 Orecchioni M, et al., Olfactory receptor 2 in vascular macrophages drives atherosclerosis by NLRP3-dependent IL-1 production. Science. 2022 Jan 14;375(6577):214-221
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/15/2026
    MGI 6.29     		The Jackson Laboratory