Gm567 Gene Detail

Summary

• Symbol
  Gm567
• Name
  predicted gene 567
• Synonyms
  LOC229861

• Feature Type
  lncRNA gene
• IDs
  MGI:2685413
  NCBI Gene: 229861
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr3:136995378-137006469 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  542 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685413	lncRNA gene	Chr3:136939260-137022535 (+)
129S1/SvImJ	ENSMUSG00200003389	lncRNA gene	Chr3:133788420-133799518 (+)
A/J	ENSMUSG00195004440	lncRNA gene	Chr3:133913082-133924183 (+)
AKR/J	ENSMUSG00220003683	lncRNA gene	Chr3:132364617-132375727 (+)
BALB/cJ	ENSMUSG00180012235	lncRNA gene	Chr3:133827340-133838444 (+)
C3H/HeJ	ENSMUSG00175020488	lncRNA gene	Chr3:133430673-133441766 (+)
C57BL/6NJ	ENSMUSG00215029706	lncRNA gene	Chr3:134153702-134164775 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005751	lincRNA gene	Chr3:130482770-130492752 (+)
CAST/EiJ	ENSTCUG00005030570	lncRNA gene	Chr3:134508759-134519516 (+)
CBA/J	ENSMUSG00210032502	lncRNA gene	Chr3:134024458-134035563 (+)
DBA/2J	ENSMUSG00185003759	lncRNA gene	Chr3:134651911-134663028 (+)
FVB/NJ	ENSMUSG00205029038	lncRNA gene	Chr3:132971775-132982869 (+)
JF1/MsJ	ENSUMUG00000004923	lncRNA gene	Chr3:133438326-133449535 (+)
LP/J	ENSMUSG00230003420	lncRNA gene	Chr3:136602225-136613316 (+)
NOD/ShiLtJ	ENSMUSG00190004934	lncRNA gene	Chr3:135040220-135051317 (+)
NZO/HlLtJ	ENSMUSG00225006227	lncRNA gene	Chr3:139080890-139091995 (+)
PWK/PhJ	ENSLUMG00010022137	lncRNA gene	Chr3:133350410-133361618 (+)
SPRET/EiJ	ENSMSPG00010014454	lncRNA gene	Chr3:134477846-134488571 (+)
WSB/EiJ	ENSIUOG00005019390	lncRNA gene	Chr3:134185991-134197084 (+)

Homology

• Gene Tree
  Gm567
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm567
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  29
• RefSeq
  2

• Ensembl
  ENSMUSG00000104610 (Evidence)
• NCBI Gene
  229861

Representative Sequences			Length	Strain/Species
genomic	229861	NCBI Gene Model | MGI Sequence Detail	11092	C57BL/6J
transcript	NR_163863	RefSeq | MGI Sequence Detail	491	ZRU/MplStud

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 12

  Diseases 1

  Phenotypes 4
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426

TSS for Gm567:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr31896	Chr3:136993653-136993658 (+)	-1,722 bp