Gm272 Pseudogene Detail

Summary

• Symbol
  Gm272
• Name
  predicted gene 272

• Feature Type
  pseudogene
  BioType Conflict
  
• IDs
  MGI:2685118
  NCBI Gene: 102631805
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:49974204-49975122 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 25.44 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  63 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685118	pseudogene	Chr13:49938134-50041813 (+)
129S1/SvImJ	ENSMUSG00200036407	pseudogene	Chr13:47253407-47254325 (+)
A/J	ENSMUSG00195029777	pseudogene	Chr13:46303145-46304063 (+)
AKR/J	ENSMUSG00220009732	pseudogene	Chr13:46119348-46120266 (+)
BALB/cJ	ENSMUSG00180009337	pseudogene	Chr13:46605415-46606333 (+)
C3H/HeJ	ENSMUSG00175028672	pseudogene	Chr13:46575821-46576739 (+)
C57BL/6NJ	ENSMUSG00215008022	pseudogene	Chr13:46722355-46723273 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005034134	pseudogene	Chr13:46634627-46635545 (+)
CBA/J	ENSMUSG00210028332	pseudogene	Chr13:46581173-46582091 (+)
DBA/2J	ENSMUSG00185033431	pseudogene	Chr13:47395206-47396124 (+)
FVB/NJ	ENSMUSG00205013466	pseudogene	Chr13:46363915-46364833 (+)
JF1/MsJ	ENSUMUG00000017451	pseudogene	Chr13:46929211-46930129 (+)
LP/J	ENSMUSG00230029215	pseudogene	Chr13:56715980-56716898 (+)
NOD/ShiLtJ	ENSMUSG00190012175	pseudogene	Chr13:46800065-46800983 (+)
NZO/HlLtJ	ENSMUSG00225036519	pseudogene	Chr13:50466390-50467308 (+)
PWK/PhJ	ENSLUMG00010022376	pseudogene	Chr13:45779492-45780410 (+)
SPRET/EiJ	ENSMSPG00010030591	pseudogene	Chr13:45905067-45905985 (+)
WSB/EiJ	ENSIUOG00005028538	pseudogene	Chr13:45940503-45941421 (+)

Homology

• Gene Tree
  Gm272
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm272
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  30
• RefSeq
  9

• Ensembl
  ENSMUSG00000113254 (Evidence)
• NCBI Gene
  102631805

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000113254	Ensembl Gene Model | MGI Sequence Detail	919	C57BL/6J
transcript	ENSMUST00000222073	Ensembl | MGI Sequence Detail	919	Not Applicable
polypeptide	XP_036014141	RefSeq | MGI Sequence Detail	1119	C57BL/6J

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69