Catip MGI Mouse Gene Detail - MGI:2685062 - ciliogenesis associated TTC17 interacting protein

Symbol

Catip
Name

ciliogenesis associated TTC17 interacting protein
Synonyms

Gm216, LOC241112

Feature Type

protein coding gene
IDs

MGI:2685062
NCBI Gene: 241112
Alliance

gene page
Transcription Start Sites

1 TSS

Sequence Map

Chr1:74401272-74408482 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 1, 38.54 cM
Mapping Data

1 experiment

SNPs within 2kb

45 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685062	protein coding gene	Chr1:74401267-74408482 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0016148	protein coding gene	Chr1:74959251-74966300 (+)
A/J	MGP_AJ_G0016131	protein coding gene	Chr1:72333918-72341051 (+)
AKR/J	MGP_AKRJ_G0016088	protein coding gene	Chr1:74345916-74352954 (+)
BALB/cJ	MGP_BALBcJ_G0016086	protein coding gene	Chr1:72402653-72409617 (+)
C3H/HeJ	MGP_C3HHeJ_G0015917	protein coding gene	Chr1:74676182-74683301 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0016539	protein coding gene	Chr1:77874495-77881425 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0014260	protein coding gene	Chr1:67919547-67926131 (+)
CAST/EiJ	MGP_CASTEiJ_G0015501	protein coding gene	Chr1:73997276-74004291 (+)
CBA/J	MGP_CBAJ_G0015890	protein coding gene	Chr1:80394795-80411099 (+)
DBA/2J	MGP_DBA2J_G0015991	protein coding gene	Chr1:71667482-71674520 (+)
FVB/NJ	MGP_FVBNJ_G0015994	protein coding gene	Chr1:70846263-70853341 (+)
LP/J	MGP_LPJ_G0016063	protein coding gene	Chr1:76061922-76068971 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0016014	protein coding gene	Chr1:83818026-83824978 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0016586	protein coding gene	Chr1:74412456-74419505 (+)
PWK/PhJ	MGP_PWKPhJ_G0015288	protein coding gene	Chr1:71115691-71122962 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0015066	protein coding gene	Chr1:73777831-73784831 (+)
WSB/EiJ	MGP_WSBEiJ_G0015563	protein coding gene	Chr1:74205590-74212555 (+)

Human Ortholog

CATIP, ciliogenesis associated TTC17 interacting protein

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

CATIP, ciliogenesis associated TTC17 interacting protein
Synonyms

C2orf62
Links

HGNC:25062

NCBI Gene ID: 375307

neXtProt AC: NX_Q7Z7H3

UniProt: Q7Z7H3
Chr Location

2q35; chr2:218356857-218368099 (+) GRCh38

MGI Vertebrate Homology

Catip stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: CATIP
Gene Tree

Catip

Diseases

1 with human CATIP associations

				Human Disease	Mouse Models
				spermatogenic failure 54 IDs spermatogenic failure 54 DOID:0112335 OMIM:619379

Click on a disease name to see all genes associated with that disease.

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Phenotype Summary

2 phenotypes from 1 allele in 1 genetic background
10 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

4
Chemically induced (other)

1
Radiation induced

1
Targeted

2
Genomic Mutations

2 involving Catip
Incidental Mutations

Mutagenetix , APF
Find Mice (IMSR)

25 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

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All GO Annotations

15
GO References

4

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

706
cDNA Data

5

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase catip

ZFIN catip

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All Sequences

45
RefSeq

11
UniProt

4
CCDS

CCDS15046.1

Ensembl

ENSMUSG00000073650 (Evidence)
NCBI Gene

241112

			Length	Strain/Species	Flank
genomic	241112	NCBI Gene Model \| MGI Sequence Detail	7211	C57BL/6J	± kb
transcript	NR_166731	RefSeq \| MGI Sequence Detail	2074	C57BL/6
polypeptide	B9EKE5	UniProt \| EBI \| MGI Sequence Detail	520	Not Applicable

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UniProt

4 Sequences
Protein Ontology

PR:000059900 ciliogenesis-associated TTC17-interacting protein

(term hierarchy)
InterPro Domains

IPR048777 Ciliogenesis-associated TTC17-interacting protein, N-terminal domain

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All nucleic 5

cDNA 5

Microarray probesets 1

Summaries

All 29

Gene Ontology 4

Phenotypes 10
Earliest

J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
Latest

J:274872 Ingham NJ, et al., Mouse screen reveals multiple new genes underlying mouse and human hearing loss. PLoS Biol. 2019 Apr;17(4):e3000194

TSS for Catip:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr7387	Chr1:74401281-74401315 (+)	26 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 04/16/2024 MGI 6.23