About   Help   FAQ
Cnksr3 Gene Detail
Summary
  • Symbol
    Cnksr3
  • Name
    Cnksr family member 3
  • Synonyms
    Magi1, MGC:37681
  • Feature Type
    protein coding gene
  • IDs
    MGI:2674130
    NCBI Gene: 215748
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:7069063-7162237 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 1.85 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2919 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2674130
 protein coding gene Chr10:7069061-7162237 (-)
129S1/SvImJ ENSMUSG00200008874
 protein coding gene Chr10:4075370-4169609 (-)
A/J ENSMUSG00195009773
 protein coding gene Chr10:4032128-4126331 (-)
AKR/J ENSMUSG00220007506
 protein coding gene Chr10:4082434-4176682 (-)
BALB/cJ ENSMUSG00180023288
 protein coding gene Chr10:4126224-4220467 (-)
C3H/HeJ ENSMUSG00175012745
 protein coding gene Chr10:4128566-4222283 (-)
C57BL/6NJ ENSMUSG00215004902
 protein coding gene Chr10:4007131-4100312 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015096
 protein coding gene Chr10:3692101-3786827 (-)
CAST/EiJ ENSTCUG00005016992
 protein coding gene Chr10:4090196-4183022 (-)
CBA/J ENSMUSG00210012353
 protein coding gene Chr10:4074374-4168077 (-)
DBA/2J ENSMUSG00185009887
 protein coding gene Chr10:4120755-4214474 (-)
FVB/NJ ENSMUSG00205008173
 protein coding gene Chr10:4073789-4167512 (-)
JF1/MsJ ENSUMUG00000033669
 protein coding gene Chr10:4173860-4267070 (-)
LP/J ENSMUSG00230015691
 protein coding gene Chr10:5725195-5819428 (-)
NOD/ShiLtJ ENSMUSG00190021943
 protein coding gene Chr10:4037633-4136464 (-)
NZO/HlLtJ ENSMUSG00225015450
 protein coding gene Chr10:10246141-10339094 (-)
PWK/PhJ ENSLUMG00010019496
 protein coding gene Chr10:4032043-4121982 (-)
SPRET/EiJ ENSMSPG00010006568
 protein coding gene Chr10:4403092-4496346 (-)
WSB/EiJ ENSIUOG00005013236
 protein coding gene Chr10:4082425-4175638 (-)



Homology
more
  • Human Ortholog
    CNKSR3, CNKSR family member 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CNKSR3, CNKSR family member 3
  • Synonyms
    CNK3, CNK3/IPCEF1, MAGI1
  • Links
    NCBI Gene ID: 154043
    UniProt: Q6P9H4

  • Chr Location
    6q25.2; chr6:154387515-154510685 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    598
  • Tissues
    1
  • cDNA Data
    29
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000015202 Ensembl Gene Model | MGI Sequence Detail 93175 C57BL/6J ±  kb
transcript ENSMUST00000015346 Ensembl | MGI Sequence Detail 3447 Not Applicable  
polypeptide ENSMUSP00000015346 Ensembl | MGI Sequence Detail 555 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 29
    cDNA 29

    Microarray probesets 3
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Gene Ontology 7
    Phenotypes 3
  • Earliest
    J:82808 Strausberg RL, et al., Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903
  • Latest
    J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory