Junos Gene Detail

Summary

• Symbol
  Junos
• Name
  jun proto-oncogene, AP-1 transcription factor subunit, opposite strand
• Synonyms
  BC042782

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:2652837
  NCBI Gene: 230451
• Alliance
  genome feature page
• Transcription Start Sites
  9 TSS

Location &
Maps

• Sequence Map
  Chr4:94940804-95056126 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 43.34 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  3032 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2652837	antisense lncRNA gene	Chr4:94927957-95056126 (+)
129S1/SvImJ	ENSMUSG00200010450	lncRNA gene	Chr4:89896342-90017663 (+)
A/J	ENSMUSG00195009253	lncRNA gene	Chr4:90451472-90567486 (+)
AKR/J	ENSMUSG00220019939	lncRNA gene	Chr4:89859715-89975286 (+)
BALB/cJ	ENSMUSG00180006175	lncRNA gene	Chr4:89398774-89514791 (+)
C3H/HeJ	ENSMUSG00175008033	lncRNA gene	Chr4:90338028-90454033 (+)
C57BL/6NJ	ENSMUSG00215016668	lncRNA gene	Chr4:90308884-90424929 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003522	antisense lncRNA gene	Chr4:87274054-87390134 (+)
CAST/EiJ	ENSTCUG00005019160	lncRNA gene	Chr4:89706380-89820553 (+)
CBA/J	ENSMUSG00210016525	lncRNA gene	Chr4:89914591-90030602 (+)
DBA/2J	ENSMUSG00185003081	lncRNA gene	Chr4:90716730-90832762 (+)
FVB/NJ	ENSMUSG00205013768	lncRNA gene	Chr4:88862451-88978490 (+)
JF1/MsJ	ENSUMUG00000003137	lncRNA gene	Chr4:90824614-90940010 (+)
LP/J	ENSMUSG00230022735	lncRNA gene	Chr4:94005377-94126698 (+)
NOD/ShiLtJ	ENSMUSG00190017847	lncRNA gene	Chr4:89358882-89474881 (+)
NZO/HlLtJ	ENSMUSG00225003697	lncRNA gene	Chr4:99160774-99276804 (+)
PWK/PhJ	ENSLUMG00010003628	lncRNA gene	Chr4:88567872-88683251 (+)
SPRET/EiJ	ENSMSPG00010015690	lncRNA gene	Chr4:90615016-90731293 (+)
WSB/EiJ	ENSIUOG00005012797	lncRNA gene	Chr4:89683033-89799085 (+)

Homology

• Gene Tree
  Junos
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Junos
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  97
• RefSeq
  7

• Ensembl
  ENSMUSG00000087366 (Evidence)
• NCBI Gene
  230451

Representative Sequences			Length	Strain/Species
genomic	230451	NCBI Gene Model | MGI Sequence Detail	115323	C57BL/6J
transcript	NR_190106	RefSeq | MGI Sequence Detail	3158	C57BL/6

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 1

References

• Summaries
  All 15

  Phenotypes 3
• Earliest
  J:388267 Li Y, et al., RNA-sequencing analysis reveals the long noncoding RNA profile in the mouse myopic retina. Front Genet. 2022;13:1014031

TSS for Junos:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr37812	Chr4:94940797-94940810 (+)	0 bp
Tssr37813	Chr4:94941094-94941110 (+)	298 bp
Tssr37814	Chr4:94942328-94942329 (+)	1,525 bp
Tssr37815	Chr4:94942914-94942918 (+)	2,112 bp
Tssr37816	Chr4:94963989-94964028 (+)	23,205 bp
Tssr37817	Chr4:94981762-94981773 (+)	40,964 bp
Tssr37818	Chr4:94992580-94992582 (+)	51,777 bp
Tssr37819	Chr4:95049700-95049727 (+)	108,910 bp
Tssr37820	Chr4:95049750-95049759 (+)	108,951 bp