About   Help   FAQ
Cstl1 Gene Detail
Summary
  • Symbol
    Cstl1
  • Name
    cystatin-like 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:2652834
    NCBI Gene: 228756
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:148592278-148597353 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 73.53 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    314 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2652834
 protein coding gene Chr2:148592272-148597354 (+)
129S1/SvImJ ENSMUSG00200026529
 protein coding gene Chr2:145704138-145709214 (+)
A/J ENSMUSG00195019131
 protein coding gene Chr2:145821624-145826697 (+)
AKR/J ENSMUSG00220045178
 protein coding gene Chr2:145417147-145422222 (+)
BALB/cJ ENSMUSG00180042352
 protein coding gene Chr2:145488090-145493163 (+)
C3H/HeJ ENSMUSG00175042019
 protein coding gene Chr2:146035142-146040215 (+)
C57BL/6NJ ENSMUSG00215014479
 protein coding gene Chr2:145559653-145564728 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024411
 protein coding gene Chr2:140876071-140881247 (+)
CAST/EiJ ENSTCUG00005042195
 protein coding gene Chr2:144674219-144679289 (+)
CBA/J ENSMUSG00210040582
 protein coding gene Chr2:145954240-145959313 (+)
DBA/2J ENSMUSG00185046630
 protein coding gene Chr2:145594316-145599389 (+)
FVB/NJ ENSMUSG00205019157
 protein coding gene Chr2:144741868-144746941 (+)
JF1/MsJ ENSUMUG00000037980
 protein coding gene Chr2:145378475-145383559 (+)
LP/J ENSMUSG00230030320
 protein coding gene Chr2:147286344-147291420 (+)
NOD/ShiLtJ ENSMUSG00190026540
 protein coding gene Chr2:145646688-145651772 (+)
NZO/HlLtJ ENSMUSG00225002746
 protein coding gene Chr2:155282947-155288020 (+)
PWK/PhJ ENSLUMG00010038597
 protein coding gene Chr2:145371089-145376180 (+)
SPRET/EiJ ENSMSPG00010026699
 protein coding gene Chr2:147906767-147911834 (+)
WSB/EiJ ENSIUOG00005043849
 protein coding gene Chr2:145393407-145398522 (+)



Homology
more
  • Human Ortholog
    CSTL1, cystatin like 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CSTL1, cystatin like 1
  • Synonyms
    CTES1, dJ322G13.4, RCET11
  • Links
    NCBI Gene ID: 128817
    UniProt: Q9H114

  • Chr Location
    20p11.21; chr20:23426104-23461209 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    603
  • Tissues
    3
  • cDNA Data
    12
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000055177 Ensembl Gene Model | MGI Sequence Detail 5076 C57BL/6J ±  kb
transcript ENSMUST00000109955 Ensembl | MGI Sequence Detail 668 Not Applicable  
polypeptide ENSMUSP00000105581 Ensembl | MGI Sequence Detail 140 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    cDNA 12
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:279308 Fujihara Y, et al., Identification of multiple male reproductive tract-specific proteins that regulate sperm migration through the oviduct in mice. Proc Natl Acad Sci U S A. 2019 Sep 10;116(37):18498-18506
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory