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Wscd1 Gene Detail
Summary
  • Symbol
    Wscd1
  • Name
    WSC domain containing 1
  • Synonyms
    MGC:55022
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448493
    NCBI Gene: 216881
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:71640746-71680473 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 43.62 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1082 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448493
 protein coding gene Chr11:71640719-71680475 (+)
129S1/SvImJ ENSMUSG00200049231
 protein coding gene Chr11:68689096-68728821 (+)
A/J ENSMUSG00195051941
 protein coding gene Chr11:68621448-68621982 (+)
AKR/J ENSMUSG00220042461
 protein coding gene Chr11:68867859-68868393 (+)
BALB/cJ ENSMUSG00180053166
 protein coding gene Chr11:68789529-68790063 (+)
C3H/HeJ ENSMUSG00175053155
 protein coding gene Chr11:68736858-68737392 (+)
C57BL/6NJ ENSMUSG00215051960
 protein coding gene Chr11:68420443-68420977 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016660
 protein coding gene Chr11:66492725-66532022 (+)
CAST/EiJ no annotation
CBA/J ENSMUSG00210051447
 protein coding gene Chr11:68590881-68591415 (+)
DBA/2J ENSMUSG00185055945
 protein coding gene Chr11:68878641-68908732 (+)
FVB/NJ ENSMUSG00205050855
 protein coding gene Chr11:68710682-68711216 (+)
JF1/MsJ ENSUMUG00000057009
 protein coding gene Chr11:69277485-69307576 (+)
LP/J ENSMUSG00230053302
 protein coding gene Chr11:69909813-69910347 (+)
NOD/ShiLtJ ENSMUSG00190054072
 protein coding gene Chr11:68863032-68863566 (+)
NZO/HlLtJ ENSMUSG00225037665
 protein coding gene Chr11:72073585-72113312 (+)
PWK/PhJ ENSLUMG00010040887
 protein coding gene Chr11:68757668-68787788 (+)
SPRET/EiJ ENSMSPG00010048194
 protein coding gene Chr11:69303174-69333486 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    WSCD1, WSC domain sialate O sulfotransferase 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    WSCD1, WSC domain sialate O sulfotransferase 1
  • Links
    NCBI Gene ID: 23302
    UniProt: Q658N2

  • Chr Location
    17p13.2; chr17:6057807-6124427 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    813
  • Tissues
    49
  • cDNA Data
    25
  • Literature Summary
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000020811 Ensembl Gene Model | MGI Sequence Detail 39728 C57BL/6J ±  kb
transcript ENSMUST00000108510 Ensembl | MGI Sequence Detail 2956 Not Applicable  
polypeptide ENSMUSP00000104150 Ensembl | MGI Sequence Detail 572 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 27
    cDNA 26
    Other 1

    Microarray probesets 4
References
more
  • Summaries
    All 43
    Developmental Gene Expression 5
    Gene Ontology 3
    Phenotypes 14
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory