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BC016548 Gene Detail
Summary
  • Symbol
    BC016548
  • Name
    cDNA sequence BC016548
  • Synonyms
    MGC:27847
Location &
Maps
more
  • Sequence Map
    Chr2:103207988-103219389 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 54.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    90 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448478
 lncRNA gene Chr2:103207988-103220601 (-)
129S1/SvImJ ENSMUSG00200002417
 lncRNA gene Chr2:100025680-100037079 (-)
A/J ENSMUSG00195000657
 lncRNA gene Chr2:100200534-100211897 (-)
AKR/J ENSMUSG00220001625
 lncRNA gene Chr2:99950470-99961873 (-)
BALB/cJ ENSMUSG00180021113
 lncRNA gene Chr2:100001637-100013000 (-)
C3H/HeJ ENSMUSG00175010325
 lncRNA gene Chr2:100275099-100286500 (-)
C57BL/6NJ ENSMUSG00215017643
 lncRNA gene Chr2:100091666-100103066 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005440
 lincRNA gene Chr2:96686875-96698208 (-)
CAST/EiJ ENSTCUG00005001669
 lncRNA gene Chr2:99357181-99368687 (-)
CBA/J ENSMUSG00210002293
 lncRNA gene Chr2:100279453-100290814 (-)
DBA/2J ENSMUSG00185005618
 lncRNA gene Chr2:99998522-100009883 (-)
FVB/NJ ENSMUSG00205011137
 lncRNA gene Chr2:99317471-99328884 (-)
JF1/MsJ ENSUMUG00000028489
 lncRNA gene Chr2:99683612-99695146 (-)
LP/J ENSMUSG00230000937
 lncRNA gene Chr2:101747886-101759247 (-)
NOD/ShiLtJ ENSMUSG00190023951
 lncRNA gene Chr2:100100999-100112402 (-)
NZO/HlLtJ ENSMUSG00225009022
 lncRNA gene Chr2:109648389-109659788 (-)
PWK/PhJ ENSLUMG00010024360
 lncRNA gene Chr2:99692026-99703550 (-)
SPRET/EiJ ENSMSPG00010039015
 lncRNA gene Chr2:101726720-101738092 (-)
WSB/EiJ ENSIUOG00005001453
 lncRNA gene Chr2:99794064-99805461 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving BC016548
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
  • Tissues
    7
  • cDNA Data
    2
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    31
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic 211039 NCBI Gene Model | MGI Sequence Detail 11402 C57BL/6J ±  kb
transcript NR_130964 RefSeq | MGI Sequence Detail 807 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 16
    Developmental Gene Expression 1
    Phenotypes 4
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory