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5330439B14Rik Gene Detail
Summary
  • Symbol
    5330439B14Rik
  • Name
    RIKEN cDNA 5330439B14 gene
Location &
Maps
more
  • Sequence Map
    Chr6:142560321-142572188 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 74.42 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    592 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2447824
 lncRNA gene Chr6:142560321-142572189 (+)
129S1/SvImJ ENSMUSG00200034371
 lncRNA gene Chr6:140101338-140113205 (+)
A/J ENSMUSG00195008308
 lncRNA gene Chr6:139007724-139019593 (+)
AKR/J ENSMUSG00220032492
 lncRNA gene Chr6:137234621-137246490 (+)
BALB/cJ ENSMUSG00180017449
 lncRNA gene Chr6:139135285-139147156 (+)
C3H/HeJ ENSMUSG00175035457
 lncRNA gene Chr6:139034595-139046466 (+)
C57BL/6NJ ENSMUSG00215029726
 lncRNA gene Chr6:139205772-139218412 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003957
 antisense lncRNA gene Chr6:140453002-140466589 (+)
CAST/EiJ ENSTCUG00005036725
 lncRNA gene Chr6:139865943-139877830 (+)
CBA/J ENSMUSG00210005234
 lncRNA gene Chr6:139097281-139109144 (+)
DBA/2J ENSMUSG00185023254
 lncRNA gene Chr6:139747827-139759698 (+)
FVB/NJ ENSMUSG00205031719
 lncRNA gene Chr6:138119994-138131536 (+)
JF1/MsJ ENSUMUG00000011475
 lncRNA gene Chr6:138409411-138420977 (+)
LP/J ENSMUSG00230010069
 lncRNA gene Chr6:140885587-140897552 (+)
NOD/ShiLtJ ENSMUSG00190007081
 lncRNA gene Chr6:139569510-139581425 (+)
NZO/HlLtJ ENSMUSG00225013936
 lncRNA gene Chr6:143737819-143749672 (+)
PWK/PhJ ENSLUMG00010036765
 lncRNA gene Chr6:137485456-137497037 (+)
SPRET/EiJ ENSMSPG00010016581
 lncRNA gene Chr6:141399419-141411316 (+)
WSB/EiJ ENSIUOG00005024082
 lncRNA gene Chr6:139811920-139823452 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    27
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 321015 NCBI Gene Model | MGI Sequence Detail 11868 C57BL/6J ±  kb
transcript NR_037679 RefSeq | MGI Sequence Detail 1392 C57BL/6  
polypeptide Q9D2A3 UniProt | EBI | MGI Sequence Detail 103 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    Genomic 2
    cDNA 3

    Microarray probesets 2
References
more
  • Summaries
    All 13
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory