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Zfc3h1 Gene Detail
Summary
  • Symbol
    Zfc3h1
  • Name
    zinc finger, C3H1-type containing
  • Synonyms
    Ccdc131, Psrc2
  • Feature Type
    protein coding gene
  • IDs
    MGI:2446143
    NCBI Gene: 216345
  • Alliance
    gene page
  • Transcription Start Sites
    14 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:115220864-115268677 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 63.51 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    1916 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2446143
 protein coding gene Chr10:115220691-115268677 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017738
 protein coding gene Chr10:118089536-118141710 (+)
A/J MGP_AJ_G0017714
 protein coding gene Chr10:113557573-113606774 (+)
AKR/J MGP_AKRJ_G0017676
 protein coding gene Chr10:116852986-116901736 (+)
BALB/cJ MGP_BALBcJ_G0017677
 protein coding gene Chr10:113955575-114003384 (+)
C3H/HeJ MGP_C3HHeJ_G0017502
 protein coding gene Chr10:117078043-117127658 (+)
C57BL/6NJ MGP_C57BL6NJ_G0018134
 protein coding gene Chr10:122196210-122250685 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015814
 protein coding gene Chr10:108184860-108232175 (+)
CAST/EiJ MGP_CASTEiJ_G0017064
 protein coding gene Chr10:117310313-117365051 (+)
CBA/J MGP_CBAJ_G0017471
 protein coding gene Chr10:126961703-127015241 (+)
DBA/2J MGP_DBA2J_G0017576
 protein coding gene Chr10:112710365-112759139 (+)
FVB/NJ MGP_FVBNJ_G0017571
 protein coding gene Chr10:111657883-111706096 (+)
LP/J MGP_LPJ_G0017651
 protein coding gene Chr10:118676392-118728040 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0017600
 protein coding gene Chr10:129907172-129957775 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0018172
 protein coding gene Chr10:116888096-116939626 (+)
PWK/PhJ MGP_PWKPhJ_G0016846
 protein coding gene Chr10:112778990-112828022 (+)
SPRET/EiJ MGP_SPRETEiJ_G0016636
 protein coding gene Chr10:115693146-115757817 (+)
WSB/EiJ MGP_WSBEiJ_G0017124
 protein coding gene Chr10:117065407-117114274 (+)



Homology
more
  • Human Ortholog
    ZFC3H1, zinc finger C3H1-type containing
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZFC3H1, zinc finger C3H1-type containing
  • Synonyms
    CCDC131, CSRC2, PSRC2
  • Links
    NCBI Gene ID: 196441
    UniProt: O60293

  • Chr Location
    12q21.1; chr12:71609599-71667725 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    91
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000034163 Ensembl Gene Model | MGI Sequence Detail 47814 C57BL/6J ±  kb
    transcript ENSMUST00000036044 Ensembl | MGI Sequence Detail 6957 Not Applicable  
    polypeptide ENSMUSP00000044069 Ensembl | MGI Sequence Detail 1992 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      5 Sequences
    • InterPro Domains
      IPR003107 HAT (Half-A-TPR) repeat
      IPR039278 NURS complex subunit red1
      IPR019607 Putative zinc-finger domain
      IPR011990 Tetratricopeptide-like helical domain superfamily
      IPR019734 Tetratricopeptide repeat
    • GlyGen
      B2RT41 1 site
    Molecular
    Reagents
    less
    • All nucleic 91
      cDNA 91

      Microarray probesets 2
    References
    more
    • Summaries
      All 33
      Gene Ontology 2
      Phenotypes 13
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    03/25/2025
    MGI 6.24     		The Jackson Laboratory