Odad1 MGI Mouse Gene Detail - MGI:2446120 - outer dynein arm docking complex subunit 1

Symbol

Odad1
Name

outer dynein arm docking complex subunit 1
Synonyms

Ccdc114

Feature Type

protein coding gene
IDs

MGI:2446120
NCBI Gene: 211535
Alliance

gene page
Transcription Start Sites

7 TSS

Sequence Map

Chr7:45573496-45598387 bp, + strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 7, 29.60 cM
Mapping Data

1 experiment

SNPs within 2kb

275 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2446120	protein coding gene	Chr7:45572591-45598387 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0032256	protein coding gene	Chr7:46250209-46275364 (+)
A/J	MGP_AJ_G0032235	protein coding gene	Chr7:45322567-45347095 (+)
AKR/J	MGP_AKRJ_G0032171	protein coding gene	Chr7:46598017-46624457 (+)
BALB/cJ	MGP_BALBcJ_G0032247	protein coding gene	Chr7:45323049-45347393 (+)
C3H/HeJ	MGP_C3HHeJ_G0031962	protein coding gene	Chr7:47078689-47104867 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0032739	protein coding gene	Chr7:48518977-48544358 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0029753	protein coding gene	Chr7:47873141-47897464 (+)
CAST/EiJ	MGP_CASTEiJ_G0031290	protein coding gene	Chr7:38529327-38556114 (+)
CBA/J	MGP_CBAJ_G0031927	protein coding gene	Chr7:50139987-50168269 (+)
DBA/2J	MGP_DBA2J_G0032084	protein coding gene	Chr7:45002932-45027307 (+)
FVB/NJ	MGP_FVBNJ_G0032036	protein coding gene	Chr7:44785175-44812239 (+)
LP/J	MGP_LPJ_G0032163	protein coding gene	Chr7:46957609-46987509 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0032073	protein coding gene	Chr7:48808877-48835608 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0032754	protein coding gene	Chr7:45800144-45828267 (+)
PWK/PhJ	MGP_PWKPhJ_G0031013	protein coding gene	Chr7:38374150-38399198 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0030851	protein coding gene	Chr7:33828829-33855249 (+)
WSB/EiJ	MGP_WSBEiJ_G0031408	protein coding gene	Chr7:46303884-46328882 (+)

Human Ortholog

ODAD1, outer dynein arm docking complex subunit 1

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

ODAD1, outer dynein arm docking complex subunit 1
Synonyms

CCDC114, CILD20
Links

HGNC:26560

NCBI Gene ID: 93233

neXtProt AC: NX_Q96M63

UniProt: Q96M63
Chr Location

19q13.33; chr19:48296452-48321971 (-) GRCh38

MGI Vertebrate Homology

Odad1 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: ODAD1
Gene Tree

Odad1

Diseases

1 with human ODAD1 associations

				Human Disease	Mouse Models
				primary ciliary dyskinesia 20 IDs primary ciliary dyskinesia 20 DOID:0110625 ICD10CM:Q34.8 OMIM:615067

Click on a disease name to see all genes associated with that disease.

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Phenotype Summary

1 phenotype from 1 allele in 1 genetic background
7 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

5
Endonuclease-mediated

1
Targeted

4
Incidental Mutations

Mutagenetix , APF , CvDC
Find Mice (IMSR)

40 strains or lines available

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All GO Annotations

14
GO References

3

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	non-membrane-bounded organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

792
Tissues

19
cDNA Data

8
Literature Summary

2

Images

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

ZFIN odad1

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All Sequences

79
RefSeq

37
UniProt

4
CCDS

CCDS21271.1

Ensembl

ENSMUSG00000040189 (Evidence)
NCBI Gene

211535

			Length	Strain/Species	Flank
genomic	ENSMUSG00000040189	Ensembl Gene Model \| MGI Sequence Detail	24892	C57BL/6J	± kb
transcript	ENSMUST00000210039	Ensembl \| MGI Sequence Detail	2598	Not Applicable
polypeptide	ENSMUSP00000147338	Ensembl \| MGI Sequence Detail	697	Not Applicable

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UniProt

4 Sequences
Protein Ontology

PR:000031753 outer dynein arm-docking complex subunit 1

(term hierarchy)
InterPro Domains

IPR049258 ODAD1, central coiled coil region

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All nucleic 8

cDNA 8

Microarray probesets 2

Summaries

All 29

Developmental Gene Expression 2

Gene Ontology 3

Phenotypes 7
Earliest

J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Latest

J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9

TSS for Odad1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr66661	Chr7:45572625-45572659 (+)	-854 bp
Tssr66662	Chr7:45572958-45572980 (+)	-527 bp
Tssr66663	Chr7:45573626-45573666 (+)	150 bp
Tssr66664	Chr7:45591660-45591665 (+)	18,167 bp
Tssr66665	Chr7:45591671-45591685 (+)	18,182 bp
Tssr66666	Chr7:45591703-45591716 (+)	18,214 bp
Tssr66667	Chr7:45591717-45591722 (+)	18,224 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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