A730063M14Rik Gene Detail

Summary

• Symbol
  A730063M14Rik
• Name
  RIKEN cDNA A730063M14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:2443898
  NCBI Gene: 100504703
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr10:126906350-126906970 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 74.50 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2443898	lncRNA gene	Chr10:126906241-126910665 (+)
129S1/SvImJ	ENSMUSG00200013560	lncRNA gene	Chr10:123258991-123263413 (+)
A/J	ENSMUSG00195017340	lncRNA gene	Chr10:123723299-123727720 (+)
AKR/J	ENSMUSG00220006473	lncRNA gene	Chr10:123327601-123332022 (+)
BALB/cJ	ENSMUSG00180011995	lncRNA gene	Chr10:123714383-123718804 (+)
C3H/HeJ	ENSMUSG00175006168	lncRNA gene	Chr10:123712137-123716577 (+)
C57BL/6NJ	ENSMUSG00215019007	lncRNA gene	Chr10:123324413-123328834 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005042469	lncRNA gene	Chr10:122681741-122686191 (+)
CBA/J	ENSMUSG00210009420	lncRNA gene	Chr10:123536307-123540748 (+)
DBA/2J	ENSMUSG00185027738	lncRNA gene	Chr10:123682732-123687146 (+)
FVB/NJ	ENSMUSG00205025083	lncRNA gene	Chr10:122942067-122946487 (+)
JF1/MsJ	ENSUMUG00000046852	lncRNA gene	Chr10:124978176-124982641 (+)
LP/J	ENSMUSG00230034502	lncRNA gene	Chr10:125599782-125604196 (+)
NOD/ShiLtJ	ENSMUSG00190015913	lncRNA gene	Chr10:123764567-123768987 (+)
NZO/HlLtJ	ENSMUSG00225037989	lncRNA gene	Chr10:129806901-129811322 (+)
PWK/PhJ	ENSLUMG00010010594	lncRNA gene	Chr10:123437315-123441780 (+)
SPRET/EiJ	ENSMSPG00010039591	lncRNA gene	Chr10:125392190-125396054 (+)
WSB/EiJ	ENSIUOG00005008858	lncRNA gene	Chr10:123323289-123327722 (+)

Homology

• Gene Tree
  A730063M14Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  26
• Gene trapped
  26
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  7
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  1

• Ensembl
  ENSMUSG00000112639 (Evidence)
• NCBI Gene
  100504703

Representative Sequences			Length	Strain/Species
genomic	100504703	NCBI Gene Model | MGI Sequence Detail	621	C57BL/6J
transcript	NR_040660	RefSeq | MGI Sequence Detail	329	C57BL/6

Molecular
Reagents

• All nucleic 7

  cDNA 7

  
  

  Microarray probesets 1

References

• Summaries
  All 12

  Developmental Gene Expression 1

  Phenotypes 3
• Earliest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
• Latest
  J:234323 Kurian L, et al., Identification of novel long noncoding RNAs underlying vertebrate cardiovascular development. Circulation. 2015 Apr 7;131(14):1278-1290

TSS for A730063M14Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr96118	Chr10:126906243-126906290 (+)	-83 bp