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Zc3hav1l Gene Detail
Summary
  • Symbol
    Zc3hav1l
  • Name
    zinc finger CCCH-type, antiviral 1-like
  • Synonyms
    B130055L09Rik, E430016P22Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2443387
    NCBI Gene: 209032
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:38264331-38276194 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 17.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    33 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2443387
 protein coding gene Chr6:38264329-38276194 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030583
 protein coding gene Chr6:36579569-36591996 (-)
A/J MGP_AJ_G0030556
 protein coding gene Chr6:34991858-35003654 (-)
AKR/J MGP_AKRJ_G0030483
 protein coding gene Chr6:36103950-36116188 (-)
BALB/cJ MGP_BALBcJ_G0030566
 protein coding gene Chr6:35183334-35195111 (-)
C3H/HeJ MGP_C3HHeJ_G0030279
 protein coding gene Chr6:36106574-36122995 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031020
 protein coding gene Chr6:37495493-37507302 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028232
 protein coding gene Chr6:32899316-32913405 (-)
CAST/EiJ MGP_CASTEiJ_G0029681
 protein coding gene Chr6:36003276-36014896 (-)
CBA/J MGP_CBAJ_G0030257
 protein coding gene Chr6:38935760-38947821 (-)
DBA/2J MGP_DBA2J_G0030401
 protein coding gene Chr6:34812637-34824396 (-)
FVB/NJ MGP_FVBNJ_G0030355
 protein coding gene Chr6:34598605-34610339 (-)
LP/J MGP_LPJ_G0030488
 protein coding gene Chr6:36627823-36639886 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030391
 protein coding gene Chr6:41298382-41313567 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031050
 protein coding gene Chr6:36036885-36048679 (-)
PWK/PhJ MGP_PWKPhJ_G0029395
 protein coding gene Chr6:34459433-34471436 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029231
 protein coding gene Chr6:35757521-35769394 (-)
WSB/EiJ MGP_WSBEiJ_G0029757
 protein coding gene Chr6:35971863-35984567 (-)



Homology
more
  • Human Ortholog
    ZC3HAV1L, zinc finger CCCH-type containing, antiviral 1 like
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZC3HAV1L, zinc finger CCCH-type containing, antiviral 1 like
  • Synonyms
    C7orf39
  • Links
    NCBI Gene ID: 92092
    neXtProt AC: NX_Q96H79
    UniProt: Q96H79

  • Chr Location
    7q34; chr7:139021498-139036042 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    716
  • Tissues
    5
  • cDNA Data
    36
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000047749 Ensembl Gene Model | MGI Sequence Detail 11864 C57BL/6J ±  kb
    transcript ENSMUST00000058524 Ensembl | MGI Sequence Detail 6536 Not Applicable  
    polypeptide ENSMUSP00000062475 Ensembl | MGI Sequence Detail 296 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • Protein Ontology
      PR:000017602 zinc finger CCCH-type antiviral protein 1-like
      (term hierarchy)
    • InterPro Domains
      IPR036388 Winged helix-like DNA-binding domain superfamily
      IPR041360 ZAP, helix turn helix N-terminal domain
      IPR000571 Zinc finger, CCCH-type
      IPR026693 Zinc finger CCCH-type antiviral protein 1-like
    Molecular
    Reagents
    less
    • All nucleic 36
      cDNA 36

      Microarray probesets 2
    Other
    Accession IDs
    less
    MGI:2444309
    References
    more
    • Summaries
      All 28
      Developmental Gene Expression 1
      Gene Ontology 3
      Phenotypes 7
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory