B930086L07Rik Gene Detail

Summary

• Symbol
  B930086L07Rik
• Name
  RIKEN cDNA B930086L07 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:2443202
  NCBI Gene: 320030
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr7:132718263-132722000 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  113 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2443202	lncRNA gene	Chr7:132718263-132722000 (-)
129S1/SvImJ	ENSMUSG00200026847	unclassified gene	Chr7:119260897-119264640 (-)
A/J	ENSMUSG00195046998	unclassified gene	Chr7:123731552-123735300 (-)
AKR/J	ENSMUSG00220016852	unclassified gene	Chr7:117193711-117197460 (-)
BALB/cJ	ENSMUSG00180013828	unclassified gene	Chr7:120437768-120441510 (-)
C3H/HeJ	ENSMUSG00175019738	unclassified gene	Chr7:121164063-121167807 (-)
C57BL/6NJ	ENSMUSG00215036286	unclassified gene	Chr7:120434469-120438208 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005049897	unclassified gene	Chr7:123742174-123745882 (-)
CBA/J	ENSMUSG00210023558	unclassified gene	Chr7:120931296-120935044 (-)
DBA/2J	ENSMUSG00185024154	unclassified gene	Chr7:125242253-125245997 (-)
FVB/NJ	ENSMUSG00205045207	unclassified gene	Chr7:120876688-120880428 (-)
JF1/MsJ	ENSUMUG00000048941	unclassified gene	Chr7:130242126-130245858 (-)
LP/J	ENSMUSG00230053234	unclassified gene	Chr7:131364231-131367978 (-)
NOD/ShiLtJ	ENSMUSG00190019946	unclassified gene	Chr7:121065467-121069203 (-)
NZO/HlLtJ	ENSMUSG00225013180	unclassified gene	Chr7:129599657-129603409 (-)
PWK/PhJ	ENSLUMG00010044058	unclassified gene	Chr7:119433644-119437354 (-)
SPRET/EiJ	ENSMSPG00010013046	unclassified gene	Chr7:120733629-120737382 (-)
WSB/EiJ	ENSIUOG00005034382	unclassified gene	Chr7:121748587-121752388 (-)

Homology

• Gene Tree
  B930086L07Rik
  

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000110282 (Evidence)
• NCBI Gene
  320030

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000110282	Ensembl Gene Model | MGI Sequence Detail	3738	C57BL/6J
transcript	AK047547	GenBank | ENA | DDBJ | MGI Sequence Detail	3011	C57BL/6J

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 4
• Earliest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for B930086L07Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr75247	Chr7:132723914-132723943 (-)	-1,929 bp