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Glt1d1 Gene Detail
Summary
  • Symbol
    Glt1d1
  • Name
    glycosyltransferase 1 domain containing 1
  • Synonyms
    5730455A04Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442755
    NCBI Gene: 319804
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:127709326-127786438 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 66.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    784 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442755
 protein coding gene Chr5:127709134-127786438 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030117
 protein coding gene Chr5:131587070-131680565 (+)
A/J MGP_AJ_G0030084
 protein coding gene Chr5:126076586-126166167 (+)
AKR/J MGP_AKRJ_G0030018
 protein coding gene Chr5:130174624-130262673 (+)
BALB/cJ MGP_BALBcJ_G0030094
 protein coding gene Chr5:127418391-127506921 (+)
C3H/HeJ MGP_C3HHeJ_G0029811
 protein coding gene Chr5:130753437-130836419 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030547
 protein coding gene Chr5:136647827-136750574 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027772
 protein coding gene Chr5:120526366-120604508 (+)
CAST/EiJ MGP_CASTEiJ_G0029220
 protein coding gene Chr5:129960880-130056501 (+)
CBA/J MGP_CBAJ_G0029781
 protein coding gene Chr5:142001488-142104301 (+)
DBA/2J MGP_DBA2J_G0029931
 protein coding gene Chr5:126073769-126153679 (+)
FVB/NJ MGP_FVBNJ_G0029887
 protein coding gene Chr5:125123341-125204912 (+)
LP/J MGP_LPJ_G0030020
 protein coding gene Chr5:132114192-132200745 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029918
 protein coding gene Chr5:145437095-145530055 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030588
 protein coding gene Chr5:129825569-129915971 (+)
PWK/PhJ MGP_PWKPhJ_G0028934
 protein coding gene Chr5:124943303-125029019 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028771
 protein coding gene Chr5:127378806-127471446 (+)
WSB/EiJ MGP_WSBEiJ_G0029294
 protein coding gene Chr5:130490882-130574144 (+)



Homology
more
  • Human Ortholog
    GLT1D1, glycosyltransferase 1 domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GLT1D1, glycosyltransferase 1 domain containing 1
  • Links
    NCBI Gene ID: 144423
    neXtProt AC: NX_Q96MS3
    UniProt: Q96MS3

  • Chr Location
    12q24.33; chr12:128853427-128984968 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000049971 Ensembl Gene Model | MGI Sequence Detail 77113 C57BL/6J ±  kb
transcript ENSMUST00000118139 Ensembl | MGI Sequence Detail 3413 Not Applicable  
polypeptide ENSMUSP00000113864 Ensembl | MGI Sequence Detail 346 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 30
    Gene Ontology 4
    Phenotypes 12
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory