A730020M07Rik Gene Detail

Summary

• Symbol
  A730020M07Rik
• Name
  RIKEN cDNA A730020M07 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:2442643
  NCBI Gene: 100503044
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr3:121428585-121440102 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 52.94 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  386 from dbSNP Build 142
• Strain Annotations
  30

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2442643	lncRNA gene	Chr3:121428585-121440104 (-)
129S1/SvImJ	ENSMUSG00200027496	lncRNA gene	Chr3:118111527-118120084 (-)
129S1/SvImJ	ENSMUSG00200026176	protein coding gene	Chr3:118111527-118120373 (-)
A/J	ENSMUSG00195016138	lncRNA gene	Chr3:118330384-118338933 (-)
A/J	ENSMUSG00195014695	protein coding gene	Chr3:118330384-118339222 (-)
AKR/J	ENSMUSG00220027065	lncRNA gene	Chr3:116724077-116732626 (-)
AKR/J	ENSMUSG00220023844	protein coding gene	Chr3:116724077-116732915 (-)
BALB/cJ	ENSMUSG00180030347	lncRNA gene	Chr3:118266857-118275406 (-)
BALB/cJ	ENSMUSG00180029614	protein coding gene	Chr3:118266857-118275695 (-)
C3H/HeJ	ENSMUSG00175026411	protein coding gene	Chr3:117813732-117822570 (-)
C3H/HeJ	ENSMUSG00175027154	lncRNA gene	Chr3:117813732-117822281 (-)
C57BL/6NJ	ENSMUSG00215008839	lncRNA gene	Chr3:118561861-118570410 (-)
C57BL/6NJ	ENSMUSG00215006134	protein coding gene	Chr3:118561861-118570699 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005718	lincRNA gene	Chr3:115141644-115150108 (-)
CAST/EiJ	ENSTCUG00005033419	lncRNA gene	Chr3:118817796-118826345 (-)
CBA/J	ENSMUSG00210002895	lncRNA gene	Chr3:118444673-118453222 (-)
CBA/J	ENSMUSG00210002654	protein coding gene	Chr3:118444673-118453511 (-)
DBA/2J	ENSMUSG00185008179	lncRNA gene	Chr3:119021622-119030172 (-)
FVB/NJ	ENSMUSG00205008354	lncRNA gene	Chr3:117388005-117396554 (-)
FVB/NJ	ENSMUSG00205006682	protein coding gene	Chr3:117388005-117396843 (-)
JF1/MsJ	ENSUMUG00000003713	lncRNA gene	Chr3:117900731-117909281 (-)
LP/J	ENSMUSG00230010975	protein coding gene	Chr3:120962169-120971015 (-)
LP/J	ENSMUSG00230011519	lncRNA gene	Chr3:120962169-120970726 (-)
NOD/ShiLtJ	ENSMUSG00190026323	protein coding gene	Chr3:119399195-119408033 (-)
NOD/ShiLtJ	ENSMUSG00190035478	lncRNA gene	Chr3:119399195-119407744 (-)
NZO/HlLtJ	ENSMUSG00225003327	lncRNA gene	Chr3:123458091-123466640 (-)
NZO/HlLtJ	ENSMUSG00225002264	protein coding gene	Chr3:123458091-123466929 (-)
PWK/PhJ	ENSLUMG00010009669	lncRNA gene	Chr3:117806275-117814808 (-)
SPRET/EiJ	ENSMSPG00010030077	lncRNA gene	Chr3:118540640-118549073 (-)
WSB/EiJ	ENSIUOG00005007094	lncRNA gene	Chr3:118610655-118619216 (-)

Homology

• Gene Tree
  A730020M07Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  8 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  1
• Radiation induced
  1
• Targeted
  2
• Genomic Mutations
  2 involving A730020M07Rik
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  6

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  57
• RefSeq
  3
• UniProt
  1

• Ensembl
  ENSMUSG00000044522 (Evidence)
• NCBI Gene
  100503044

Representative Sequences			Length	Strain/Species
genomic	100503044	NCBI Gene Model | MGI Sequence Detail	11518	C57BL/6J
transcript	NR_036456	RefSeq | MGI Sequence Detail	2384	C57BL/6
polypeptide	Q8C983	UniProt | EBI | MGI Sequence Detail	109	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 3

References

• Summaries
  All 21

  Diseases 1

  Phenotypes 8
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426