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Efcab14 Gene Detail
Summary
  • Symbol
    Efcab14
  • Name
    EF-hand calcium binding domain 14
  • Synonyms
    4732418C07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:2442397
    NCBI Gene: 230648
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:115594941-115634524 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 53.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    168 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442397
 protein coding gene Chr4:115594914-115634590 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028606
 protein coding gene Chr4:116574289-116616838 (+)
A/J MGP_AJ_G0028567
 protein coding gene Chr4:112128366-112167919 (+)
AKR/J MGP_AKRJ_G0028516
 protein coding gene Chr4:114538400-114577778 (+)
BALB/cJ MGP_BALBcJ_G0028588
 protein coding gene Chr4:112759816-112799262 (+)
C3H/HeJ MGP_C3HHeJ_G0028302
 protein coding gene Chr4:116111678-116151105 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029029
 protein coding gene Chr4:121100053-121140090 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026313
 protein coding gene Chr4:106179304-106218124 (+)
CAST/EiJ MGP_CASTEiJ_G0027737
 protein coding gene Chr4:113312967-113357670 (+)
CBA/J MGP_CBAJ_G0028269
 protein coding gene Chr4:124386681-124436149 (+)
DBA/2J MGP_DBA2J_G0028417
 protein coding gene Chr4:112776533-112816149 (+)
FVB/NJ MGP_FVBNJ_G0028385
 protein coding gene Chr4:111262845-111302245 (+)
LP/J MGP_LPJ_G0028519
 protein coding gene Chr4:116804868-116844532 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028412
 protein coding gene Chr4:129406198-129454524 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029066
 protein coding gene Chr4:115681392-115725431 (+)
PWK/PhJ MGP_PWKPhJ_G0027462
 protein coding gene Chr4:109534244-109574682 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027285
 protein coding gene Chr4:111931705-111975797 (+)
WSB/EiJ MGP_WSBEiJ_G0027815
 protein coding gene Chr4:115553114-115593396 (+)



Homology
more
  • Human Ortholog
    EFCAB14, EF-hand calcium binding domain 14
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    EFCAB14, EF-hand calcium binding domain 14
  • Synonyms
    KIAA0494
  • Links
    NCBI Gene ID: 9813
    neXtProt AC: NX_O75071
    UniProt: O75071

  • Chr Location
    1p33; chr1:46674659-46719146 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    761
  • Tissues
    43
  • cDNA Data
    100
  • Literature Summary
    2
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000034210 Ensembl Gene Model | MGI Sequence Detail 39584 C57BL/6J ±  kb
    transcript ENSMUST00000074425 Ensembl | MGI Sequence Detail 4300 Not Applicable  
    polypeptide ENSMUSP00000074025 Ensembl | MGI Sequence Detail 529 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 101
      cDNA 101

      Microarray probesets 9
    References
    more
    • Summaries
      All 35
      Developmental Gene Expression 2
      Gene Ontology 1
      Phenotypes 13
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:228563 Koscielny G, et al., The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. Nucleic Acids Res. 2014 Jan;42(Database issue):D802-9
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory