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9630028B13Rik Gene Detail
Summary
  • Symbol
    9630028B13Rik
  • Name
    RIKEN cDNA 9630028B13 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2442281
    NCBI Gene: 319562
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:185161554-185174016 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 89.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    230 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442281
 lncRNA gene Chr1:185161552-185174016 (-)
129S1/SvImJ MGP_129S1SvImJ_G0002812
 antisense lncRNA gene Chr1:192167520-192181038 (-)
A/J MGP_AJ_G0002789
 antisense lncRNA gene Chr1:184306772-184319087 (-)
AKR/J MGP_AKRJ_G0002770
 antisense lncRNA gene Chr1:189737665-189750517 (-)
BALB/cJ MGP_BALBcJ_G0002776
 antisense lncRNA gene Chr1:184948460-184960909 (-)
C3H/HeJ MGP_C3HHeJ_G0002734
 antisense lncRNA gene Chr1:190607537-190619990 (-)
C57BL/6NJ MGP_C57BL6NJ_G0002918
 antisense lncRNA gene Chr1:198300485-198312945 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002465
 antisense lncRNA gene Chr1:175294687-175307564 (-)
CAST/EiJ MGP_CASTEiJ_G0002706
 antisense lncRNA gene Chr1:190038295-190050763 (-)
CBA/J MGP_CBAJ_G0002729
 antisense lncRNA gene Chr1:205692926-205707381 (-)
DBA/2J MGP_DBA2J_G0002736
 antisense lncRNA gene Chr1:183065175-183077432 (-)
FVB/NJ MGP_FVBNJ_G0002756
 antisense lncRNA gene Chr1:181166277-181178626 (-)
LP/J MGP_LPJ_G0002812
 antisense lncRNA gene Chr1:193316576-193330173 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0002746
 antisense lncRNA gene Chr1:212567169-212580521 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0002923
 antisense lncRNA gene Chr1:189611404-189623870 (-)
PWK/PhJ MGP_PWKPhJ_G0002664
 antisense lncRNA gene Chr1:182277149-182289776 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002614
 antisense lncRNA gene Chr1:188566598-188579017 (-)
WSB/EiJ MGP_WSBEiJ_G0002735
 antisense lncRNA gene Chr1:189776161-189789404 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    718
  • Tissues
    3
  • cDNA Data
    5
  • Literature Summary
    4
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 319562 NCBI Gene Model | MGI Sequence Detail 12463 C57BL/6J ±  kb
transcript NR_038006 RefSeq | MGI Sequence Detail 3406 C57BL/6  
polypeptide Q8BH25 UniProt | EBI | MGI Sequence Detail 160 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
References
more
  • Summaries
    All 13
    Developmental Gene Expression 4
    Phenotypes 1
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:314103 Ulmke PA, et al., Molecular Profiling Reveals Involvement of ESCO2 in Intermediate Progenitor Cell Maintenance in the Developing Mouse Cortex. Stem Cell Reports. 2021 Apr 13;16(4):968-984
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory