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B230334C09Rik Gene Detail
Summary
  • Symbol
    B230334C09Rik
  • Name
    RIKEN cDNA B230334C09 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2442224
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:157772823-157781749 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, Syntenic
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    19 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2442224
 lncRNA gene Chr3:157772823-157781749 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003868
 antisense lncRNA gene Chr3:162225169-162239805 (-)
A/J MGP_AJ_G0003848
 antisense lncRNA gene Chr3:156315338-156324267 (-)
AKR/J MGP_AKRJ_G0003825
 antisense lncRNA gene Chr3:160465102-160474029 (-)
BALB/cJ MGP_BALBcJ_G0003835
 antisense lncRNA gene Chr3:156128503-156137430 (-)
C3H/HeJ MGP_C3HHeJ_G0003780
 antisense lncRNA gene Chr3:160864814-160873743 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003979
 antisense lncRNA gene Chr3:167542447-167551373 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003479
 antisense lncRNA gene Chr3:150925229-150934246 (-)
CAST/EiJ MGP_CASTEiJ_G0003746
 antisense lncRNA gene Chr3:161013689-161022870 (-)
CBA/J MGP_CBAJ_G0003774
 antisense lncRNA gene Chr3:173490287-173499216 (-)
DBA/2J MGP_DBA2J_G0003789
 antisense lncRNA gene Chr3:155363729-155373044 (-)
FVB/NJ MGP_FVBNJ_G0003810
 antisense lncRNA gene Chr3:152713391-152722316 (-)
LP/J MGP_LPJ_G0003870
 antisense lncRNA gene Chr3:163556142-163565142 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003797
 antisense lncRNA gene Chr3:182074279-182084024 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003978
 antisense lncRNA gene Chr3:160146210-160155139 (-)
PWK/PhJ MGP_PWKPhJ_G0003702
 antisense lncRNA gene Chr3:155292545-155301735 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003647
 antisense lncRNA gene Chr3:158358025-158366898 (-)
WSB/EiJ MGP_WSBEiJ_G0003782
 antisense lncRNA gene Chr3:161109634-161119567 (-)



Homology
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
  • All Sequences
    27
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000104597 Ensembl Gene Model | MGI Sequence Detail 8927 C57BL/6J ±  kb
transcript ENSMUST00000200255 Ensembl | MGI Sequence Detail 8927 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 9
  • Earliest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory