E030032P16Rik Gene Detail

Summary

• Symbol
  E030032P16Rik
• Name
  RIKEN cDNA E030032P16 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:2442014
  NCBI Gene: 319431
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr5:98494253-98497183 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  156 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2442014	lncRNA gene	Chr5:98494253-98497183 (+)
129S1/SvImJ	ENSMUSG00200006946	unclassified gene	Chr5:92217360-92220278 (+)
A/J	ENSMUSG00195037563	unclassified gene	Chr5:91776309-91779227 (+)
AKR/J	ENSMUSG00220039737	unclassified gene	Chr5:91245858-91248789 (+)
BALB/cJ	ENSMUSG00180036608	unclassified gene	Chr5:91932545-91935480 (+)
C3H/HeJ	ENSMUSG00175034236	unclassified gene	Chr5:94030842-94033743 (+)
C57BL/6NJ	ENSMUSG00215025560	unclassified gene	Chr5:91877396-91880326 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0001434	unclassified gene	Chr5:91313065-91315921 (+)
CAST/EiJ	ENSTCUG00005025085	unclassified gene	Chr5:91272688-91275566 (+)
CBA/J	ENSMUSG00210034453	unclassified gene	Chr5:92789945-92792842 (+)
DBA/2J	ENSMUSG00185037806	unclassified gene	Chr5:95705923-95708824 (+)
FVB/NJ	ENSMUSG00205036365	unclassified gene	Chr5:91693520-91696451 (+)
JF1/MsJ	ENSUMUG00000044068	unclassified gene	Chr5:98664934-98667813 (+)
LP/J	ENSMUSG00230028346	unclassified gene	Chr5:99770321-99773243 (+)
NOD/ShiLtJ	ENSMUSG00190028939	unclassified gene	Chr5:91702583-91705501 (+)
NZO/HlLtJ	ENSMUSG00225013133	unclassified gene	Chr5:107521823-107524757 (+)
PWK/PhJ	ENSLUMG00010016082	unclassified gene	Chr5:90795869-90798732 (+)
SPRET/EiJ	ENSMSPG00010027092	unclassified gene	Chr5:93677212-93680119 (+)
WSB/EiJ	ENSIUOG00005031959	unclassified gene	Chr5:94415062-94417983 (+)

Homology

• Gene Tree
  E030032P16Rik
  

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21

• Ensembl
  ENSMUSG00000104545 (Evidence)
• NCBI Gene
  319431

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104545	Ensembl Gene Model | MGI Sequence Detail	2931	C57BL/6J
transcript	AK087185	GenBank | ENA | DDBJ | MGI Sequence Detail	2933	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 5
• Earliest
  J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573